Gene Information

Name : Aeqsu_0771 (Aeqsu_0771)
Accession : YP_006417293.1
Strain : Aequorivita sublithincola DSM 14238
Genome accession: NC_018013
Putative virulence/resistance : Unknown
Product : PLP-dependent enzyme, glutamate decarboxylase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 778970 - 780409 bp
Length : 1440 bp
Strand : -
Note : PFAM: Pyridoxal-dependent decarboxylase conserved domain

DNA sequence :
GTGAAAATTCAGAATAAAGCAACCTTGGAATTGAGCCATGACGAAATGAAATCCTATGGTTATGAAGTAGTTGACGCTAT
TGTAGATCACTTTTCAACCCAAAATCAAAAATTGCCAGTAGTTTCGGGTACGCGCGGAGAAATGGAGAAACTTTTTCTAG
AAGAAGCTCCCGAAAATGCAAGCGATCCTAAAAAGGTTTTAAACTTCGTTTTGGATGAAGTGATGACTAAAAGCAACATC
GTTTCGCACCCAAAGTCATATTCCTTCGTTCCTGGACCTAGTAATTATATTAGTGCAATGGCAGATAGCCTAACGGCTGG
CTTCAATATATTCTCTGGCGGATGGCAAGCTTCGCCAGCTGCTGCAGAAATGGAAATCGTGACGATGAACTGGCTTTTAA
AAATGTTCGGTTTTCCACAGAAAAAAGGTGGTGGAATATTTACGAGTGGCGGTTCTATGGCAAATTTAACTGCTTTGGTT
ACCGCACGTACCGTAAAATGTGGTGACGATTTTAGCAAAGCCATAATCTATCTTTCAGATCAGGCGCATTCTTCAAATAT
TAAGGCAATTCGGGTACTTGGTTTTAGTAAAGAACAAATCCGAATTATCCCTACAGACGGCGAATTCAAATTTTCACTAA
ATAAATTAAAGAACGCAATTGCAAAAGATAGATTGGAAGGTTTACAGCCATTTTGCTTAATCGCAACTGCCGGAACTACT
AATACTGGAACCGTCGATCCACTTTCAGACATTGCAAAAATCTGTAAAAAAGAAGACATTTGGTTTCATATTGATGGCGC
TTATGGGGGATTTGCAATCCTTTCTGAAGATGGAAAACAACTTATGAAAGGAATTGAAAAGGCAGATTCGTTAACCATCG
ATCCACATAAATGGTTTTTTCAACCTTATGAAATTGGTTGTCTTTTGGTGAAAAAGCACAAATGGCTAAAAGGAACTTTC
ACCGAAAAACCTGAATATTTACGCGACATTGAAGGCAATGAATCTGAAATAAATTTCTACGATCACGGTATTGAATTAAC
GCGTCGTTTTAGAGCCCTAAAGTTTTATATGTCTGTAAAGACGTTCGGATTGGGCGAATTCAGAAAAGCAATTACCTACA
ATGTGAAATTAGCTGAAGCAACGGAAAGCTTTCTTCGAAAAAGTTCTAATTGGGAAGTTATTTCGCCAGCAACTTTAGCG
GTAATTAACTTTCGATATAATCCAATTGGCAACAAACTTTCAGAGAAACAATTAGATGCTTTAAACCAACGAATTTCACA
AAATGTAGTTGATTCAAAAAAGGCTTTATTAGTAACCACAGTGCTTAACAGACAAATTGTATTGCGAATGTGTTTGATAA
ATCCACGAACTACACTAGATGACGTAAAAGAAACCATCGCTCTTTGCGAATCTTTTGCAAATGAAAAAGTCCTGGCTTGA

Protein sequence :
MKIQNKATLELSHDEMKSYGYEVVDAIVDHFSTQNQKLPVVSGTRGEMEKLFLEEAPENASDPKKVLNFVLDEVMTKSNI
VSHPKSYSFVPGPSNYISAMADSLTAGFNIFSGGWQASPAAAEMEIVTMNWLLKMFGFPQKKGGGIFTSGGSMANLTALV
TARTVKCGDDFSKAIIYLSDQAHSSNIKAIRVLGFSKEQIRIIPTDGEFKFSLNKLKNAIAKDRLEGLQPFCLIATAGTT
NTGTVDPLSDIAKICKKEDIWFHIDGAYGGFAILSEDGKQLMKGIEKADSLTIDPHKWFFQPYEIGCLLVKKHKWLKGTF
TEKPEYLRDIEGNESEINFYDHGIELTRRFRALKFYMSVKTFGLGEFRKAITYNVKLAEATESFLRKSSNWEVISPATLA
VINFRYNPIGNKLSEKQLDALNQRISQNVVDSKKALLVTTVLNRQIVLRMCLINPRTTLDDVKETIALCESFANEKVLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0069 YP_251984.1 hypothetical protein Not tested SCCmec Protein 6e-66 41
unnamed BAH57704.1 hypothetical protein Not tested Type-VII SCCmec Protein 2e-65 41