Gene Information

Name : Aeqsu_0699 (Aeqsu_0699)
Accession : YP_006417222.1
Strain : Aequorivita sublithincola DSM 14238
Genome accession: NC_018013
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : -
COG ID : -
EC number : 6.1.1.6
Position : 694803 - 696494 bp
Length : 1692 bp
Strand : +
Note : PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial

DNA sequence :
ATGCAACTTTCTGAACTGGAAATCATCCGAAGAGAAAAACTTCAACAACTACGAGACCGTGGAATAAACCCTTATCCCGC
AGATTTATATCCTGTAACTGACACCTCAAAAAAGTTGAAGGACAATTTTGAGGAAGGAAAAAAGGTAGTCGTTGCAGGAA
GGTTAATGTCTCGTAGAATTCAAGGTTCAGCTTCATTTGCGGAGCTTCAAGATGCCGATGGACGTATACAAGTATATTTT
AACCGTGATGAAATCTGTACTGGCGAAGACAAAAGCCATTATAACGATGTTTATAAAAAACTCCTCGACATAGGCGATTT
CATAGGAATTGAAGGCGAACTTTTCAATACCCAAGTTGGTGAAAAAACCATCATGGTTAAGAATTTTACCTTGCTAAGCA
AAGCATTAAAACCCTTACCACAACCAAGAGTTGATGCTGATGGAAAAATTCACGATGCTTTTACGGACCCAGAACAACGC
TATCGTCAGCGCTATGCAGATTTGGTGGTAAATCCGCACGTAAAGGAAATTTTCGTAAAGCGATCCAAACTTTTCAACGC
TATGCGTACTTTCTTTAATGACCGCGGTTATTTTGAAGTAGAAACTCCAGTATTGCAACCAATTCCTGGCGGTGCTGCGG
CGCGACCTTTTATAACACACCATAATTCCTTAGACATTCCGCTGTATATGCGAATTGCAAATGAATTATACTTGAAAAGA
TTGATTGTCGGTGGTTTTGACGGTGTTTATGAATTCTCCAAAAACTTTAGAAATGAAGGCATGGATCGCACCCACAATCC
AGAATTTACCGCGATGGAAATTTATGTTTCCTACAAAGATTACAATTGGATGATGGATTTCTGCGAACAATTGCTGGAAT
ACTGTGCCATCGAAGTAAACGGAACCTCAAAAACAACCTTCGGAAAACACGAAATAGATTTTAAAGCGCCTTATCCAAGA
GTAACTATGGCGGAATCTATCGAACATTTTACAGGTTTTGACATTACGGGAAAAACCGAAGACGAAATCCGCAAAGCTGC
TCAGGATATGAAAATATCTGTAGATGAAACAATGGGTAAAGGAAAACTGATTGATGAAATTTTCGGCGAAAAGTGCGAAG
GCAACTACATTCAACCAACCTTCATTACAGATTACCCAAAGGAAATGAGTCCGCTTTGTAAAGAACACCGCGAAAATCCA
GAACTTACGGAGCGTTTTGAACTAATGGTTTGTGGAAAGGAAATAGCAAACGCATATAGCGAATTAAACGACCCAATAGA
CCAACGCGAACGTTTTGAAGCGCAACTAAAACTAGCGGACAGAGGCGATGACGAAGCAACAGCATTTATAGATTACGATT
TTCTACGCGCTTTAGAATATGGAATGCCGCCAACAAGCGGAATGGGCATCGGGATGGACCGTTTGATTATGTTTTTGACC
AATAATCCTTCTATCCAAGAAGTACTTTTCTTCCCACAAATGCGCCCTGAAAAGAAAAAGGTTGAAATGACCGAAGACGA
AAAAGCAGTTTACACAATTCTAAAAGCCAATTCACCAGTTGCTTTGGAAGAACTAAAAGCACAAAGTGGTTTGAGTAATA
AGAAGTGGGATAAAGCTATGAAAGGTTTGACGGCTTCAAAAGTTGCGAAAGTTGAGAAAGTTGAGGAAAATTTGATGGTT
ACGGTACTTTAA

Protein sequence :
MQLSELEIIRREKLQQLRDRGINPYPADLYPVTDTSKKLKDNFEEGKKVVVAGRLMSRRIQGSASFAELQDADGRIQVYF
NRDEICTGEDKSHYNDVYKKLLDIGDFIGIEGELFNTQVGEKTIMVKNFTLLSKALKPLPQPRVDADGKIHDAFTDPEQR
YRQRYADLVVNPHVKEIFVKRSKLFNAMRTFFNDRGYFEVETPVLQPIPGGAAARPFITHHNSLDIPLYMRIANELYLKR
LIVGGFDGVYEFSKNFRNEGMDRTHNPEFTAMEIYVSYKDYNWMMDFCEQLLEYCAIEVNGTSKTTFGKHEIDFKAPYPR
VTMAESIEHFTGFDITGKTEDEIRKAAQDMKISVDETMGKGKLIDEIFGEKCEGNYIQPTFITDYPKEMSPLCKEHRENP
ELTERFELMVCGKEIANAYSELNDPIDQRERFEAQLKLADRGDDEATAFIDYDFLRALEYGMPPTSGMGIGMDRLIMFLT
NNPSIQEVLFFPQMRPEKKKVEMTEDEKAVYTILKANSPVALEELKAQSGLSNKKWDKAMKGLTASKVAKVEKVEENLMV
TVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 2e-97 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Aeqsu_0699 YP_006417222.1 lysyl-tRNA synthetase VFG1668 Protein 1e-97 44