Gene Information

Name : Aeqsu_2910 (Aeqsu_2910)
Accession : YP_006419366.1
Strain : Aequorivita sublithincola DSM 14238
Genome accession: NC_018013
Putative virulence/resistance : Virulence
Product : glycosyl transferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3147168 - 3147803 bp
Length : 636 bp
Strand : -
Note : PFAM: Bacterial sugar transferase

DNA sequence :
TTGAGAGCTTTATTCTTTAGCAACATGTACAAAAGCATCACAAAACCAACATTCGATTTCTTTTGTGCACTGTTGGGTCT
CTTAGTTTTAAGTCCAATATTTTTAATAGCCTGGATAGGTTTGGCAATCGCCAATAACGGTAAACCCTTTTTCTATCAAC
GTCGTCCGGGAAAACGGGAACGTATATTTACAATTATAAAATTCAAAACAATGAACGACAAACGCAGCGCTGACGGACAA
TTGTTACCCGATGCCAAACGCCTAACGGCCATTGGCAGTTTTGTACGTAAAACCTCTTTAGACGAATTACCACAGTTACT
AAATGTGCTAAAAGGCGATATGAGCTTCGTAGGTCCGCGACCATTATTGCCAGAGTATTTACCTTTGTACAGTGAAACGC
AACGAAAACGCCACAATGTAAAGCCAGGAATAACTGGATGGGCGCAGGTCAATGGACGAAATGCCATTTCTTGGGAGCAG
AAGTTTGCGTATGATGTTTGGTATGTGGCGCATCAAAGTTTTGCGTTGGATTTACAGATTCTATTTAGGACAGTAAAAAA
AGTATTTAAAAGTGAAGGGATTTCGCAGACGGGGCAGGTTACGACAGAGCGTTTTTTAGGAAATGCGAAAGAATGA

Protein sequence :
MRALFFSNMYKSITKPTFDFFCALLGLLVLSPIFLIAWIGLAIANNGKPFFYQRRPGKRERIFTIIKFKTMNDKRSADGQ
LLPDAKRLTAIGSFVRKTSLDELPQLLNVLKGDMSFVGPRPLLPEYLPLYSETQRKRHNVKPGITGWAQVNGRNAISWEQ
KFAYDVWYVAHQSFALDLQILFRTVKKVFKSEGISQTGQVTTERFLGNAKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 1e-28 44
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 1e-27 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Aeqsu_2910 YP_006419366.1 glycosyl transferase VFG1309 Protein 1e-30 43