Gene Information

Name : Aeqsu_0024 (Aeqsu_0024)
Accession : YP_006416571.1
Strain : Aequorivita sublithincola DSM 14238
Genome accession: NC_018013
Putative virulence/resistance : Virulence
Product : putative transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 30622 - 30822 bp
Length : 201 bp
Strand : -
Note : PFAM: Helix-turn-helix

DNA sequence :
ATGAAAAATACTTTAAAAGTTGAACGTGCCATTCTCAACCTAACGCAAGATGAACTTGCGCAAAAAATTGGGGTATCGCG
ACAGACCATTAATTCTATTGAGACCAATCGGTATGTGCCTTCAACGCTTTTGGCACTAAAACTATCAAAACTTTTTGACA
AGCCTGTAAACAATTTTTTTAAACTTGAAGAAAATGATTGA

Protein sequence :
MKNTLKVERAILNLTQDELAQKIGVSRQTINSIETNRYVPSTLLALKLSKLFDKPVNNFFKLEEND

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 9e-08 47
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 5e-06 45
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 4e-06 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Aeqsu_0024 YP_006416571.1 putative transcriptional regulator VFG2168 Protein 2e-06 45
Aeqsu_0024 YP_006416571.1 putative transcriptional regulator VFG2175 Protein 2e-06 45