Gene Information

Name : Aeqsu_2391 (Aeqsu_2391)
Accession : YP_006418866.1
Strain : Aequorivita sublithincola DSM 14238
Genome accession: NC_018013
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2586866 - 2587339 bp
Length : 474 bp
Strand : -
Note : PFAM: Predicted SPOUT methyltransferase; TIGRFAM: rRNA large subunit m3Psi methyltransferase RlmH

DNA sequence :
ATGAAAATCACACTACTCGCCATTGGCAAAACCGATAATAAGCAATTGCAATCCTTGATGGATGATTACACCAAGCGATT
GGGGTTTTATATTTCTTTTGAATTAGAAGTGATTCCAGATATTAAGAATGCTAAAAATCTTTCTGAAACCCTTCAAAAAC
AAGCGGAAGGCGAAGAAATTTTAAAGCGAACTACTACAGCAGATGTTCTGATTTTACTTGATGAAAAGGGAAGAACGTTC
ACTTCGGAAGGCTTCTCGGAGTTTCTTCAGAAGAGAATGAATAGCGGTTTGAAAAACCTCATCTTCATAATTGGCGGACC
TTATGGCTTTAGCGAAACTGTTTATGAACGCGCTAATGGAAAAGTTTCACTTTCGTCAATGACTTTTTCGCATCAAATGG
TTCGGCTTTTCTTTATTGAACAGCTTTATAGAGGCTTTACGATTCTCAGAAATGAGCCTTATCATCATAGATAG

Protein sequence :
MKITLLAIGKTDNKQLQSLMDDYTKRLGFYISFELEVIPDIKNAKNLSETLQKQAEGEEILKRTTTADVLILLDEKGRTF
TSEGFSEFLQKRMNSGLKNLIFIIGGPYGFSETVYERANGKVSLSSMTFSHQMVRLFFIEQLYRGFTILRNEPYHHR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0023 NP_763578.1 rRNA large subunit methyltransferase Not tested SCCpbp4 Protein 4e-28 42
SERP2529 YP_190070.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 4e-28 42
orfX YP_251938.1 rRNA large subunit methyltransferase Not tested SCCmec Protein 1e-27 41