Gene Information

Name : Aeqsu_2223 (Aeqsu_2223)
Accession : YP_006418698.1
Strain : Aequorivita sublithincola DSM 14238
Genome accession: NC_018013
Putative virulence/resistance : Virulence
Product : nucleoside-diphosphate-sugar epimerase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2398288 - 2399271 bp
Length : 984 bp
Strand : +
Note : PFAM: NAD dependent epimerase/dehydratase family

DNA sequence : 
ATGCAAAGACCCAAATACCACACCGCAAACCTTTCAAACCACACTTTTCTCGTTACCGGCGGGGCTGGGTTTATTGGCTC
TAACCTTGTTGCCTATTTACTGAATAACAACGCCAAAAAAGTACGTGTACTTGATAATTTGGCTACTGGCTTTATGAAAA
ACCTGGAGCCATTTCAAAACAATCCGAGCTTTGAGTTTTTGGAGGGCGATATTCGTGATGTGGAAATCTGCAAAAAAGCA
ATGGACGGGATAGATTATGTTTCGCATCAAGCTGCTTTGGGCTCTGTGCCGCGTTCTATTAACGATCCTATTACTAGTAA
TGATGTAAATGTGGGTGGTTTTTTGAATATGCTTGTCGCTCAAAAGGAAAGTAAAACCGTTAAGCGCTTGGTTTATGCGG
CATCCAGTTCTACGTATGGCGATAGCCCAAGCCTTCCCAAAGTAGAAGATACCATTGGGAAACCTTTGTCGCCCTATGCG
GTTACTAAGTTGGTTAATGAACTTTATGCCGACGTATTCTACAAAACCTACGGCACACAGACTATTGGCCTGCGTTACTT
CAACGTTTTTGGTCCTAACCAAAGTCCCACGGGAGCTTATGCAGCGGTAATCCCGTTGTTTATGCAAGCGCTGAAAGATG
AAAAAGCCCCAACGATAAATGGCGATGGCGAACAGACCCGCGATTTTACCTTTGTGCAAAACGCCGTTCAAGCAAATGTG
CGCGCTCTTTTTGCTAAAGAGGAAGCTGTAAACCAAGTATTCAATGTAGCTTTTGGCGAAAGGATAAGTTTAAATACACT
TTGGAGTGATTTACAAAGTATTTCTGAAAAAGAATTGAAAGCAATCAACGGCCCAGAACGTAAAGGTGATGTTCGCGACT
CTTTGGCTAATATTAACAAGGCCAGAACACTTATGGGTTATGATCCTTTGTTCTCTGTGAAGGAAGGTTTAAAATTAACC
TGGAAAGATTTCACCAAAGCTTAA

Protein sequence : 
MQRPKYHTANLSNHTFLVTGGAGFIGSNLVAYLLNNNAKKVRVLDNLATGFMKNLEPFQNNPSFEFLEGDIRDVEICKKA
MDGIDYVSHQAALGSVPRSINDPITSNDVNVGGFLNMLVAQKESKTVKRLVYAASSSTYGDSPSLPKVEDTIGKPLSPYA
VTKLVNELYADVFYKTYGTQTIGLRYFNVFGPNQSPTGAYAAVIPLFMQALKDEKAPTINGDGEQTRDFTFVQNAVQANV
RALFAKEEAVNQVFNVAFGERISLNTLWSDLQSISEKELKAINGPERKGDVRDSLANINKARTLMGYDPLFSVKEGLKLT
WKDFTKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase Virulence SPI-7 Protein 3e-64 49
tviC NP_807944.1 VI polysaccharide biosynthesis epimerase Virulence SPI-7 Protein 3e-64 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Aeqsu_2223 YP_006418698.1 nucleoside-diphosphate-sugar epimerase VFG0430 Protein 1e-64 49