Gene Information

Name : Aeqsu_2216 (Aeqsu_2216)
Accession : YP_006418691.1
Strain : Aequorivita sublithincola DSM 14238
Genome accession: NC_018013
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2388832 - 2389539 bp
Length : 708 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence : 
ATGAGTTTAGTAATAAAGATTCGAAATATCACAAGAGATTTTCCACTTGGTAATGAAATTGTAAAAGTTTTAAAAGGAAT
TGACCTAGACATTGAACGCGGTGAATACGTAGCATTGATGGGACCTTCAGGTTCTGGAAAATCTACTTTGATGAATCTTT
TGGGCTGTTTAGACACACCAACTTCGGGCAGCTACGAACTAAACGGAAGCGACGTTAGCAATATGAGTGATGATGAGTTA
GCTGAAATTCGCAATAAAGAAATAGGTTTCGTTTTTCAAACCTTTAACCTTCTGCCCCGCACTACTGCGCTAGAAAATGT
GGCTTTACCGATGATTTATGCTGGCGTATCAAAAGCAGATAGAACCGAGCGCGCAAAACAAGTTTTAACAGATGTTGGAC
TTGCAGATAGAATGGATCACAAACCAAACCAGCTCTCTGGAGGACAACGTCAACGCGTAGCGGTTGGAAGAGCCTTGGTA
AATAAACCTTCCATAATTTTAGCCGATGAACCTACGGGAAATTTAGATTCGAAAACTTCGGAAGAAATTATGGCTTTATT
CAACGATATTCATAAAGCTGGAAACACGGTAATAGTAGTTACTCACGAAGAAGAAATTGCGGAACGCGCTCATAGAATTA
TCCGTCTTCGGGATGGGGTGATTGAGAGTGATACTAAGAAGGAAGTTGGCTTTAGTCAGTTGCTGTAG

Protein sequence : 
MSLVIKIRNITRDFPLGNEIVKVLKGIDLDIERGEYVALMGPSGSGKSTLMNLLGCLDTPTSGSYELNGSDVSNMSDDEL
AEIRNKEIGFVFQTFNLLPRTTALENVALPMIYAGVSKADRTERAKQVLTDVGLADRMDHKPNQLSGGQRQRVAVGRALV
NKPSIILADEPTGNLDSKTSEEIMALFNDIHKAGNTVIVVTHEEEIAERAHRIIRLRDGVIESDTKKEVGFSQLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-32 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-32 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 8e-32 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Aeqsu_2216 YP_006418691.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 1e-56 57
Aeqsu_2216 YP_006418691.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 3e-48 55
Aeqsu_2216 YP_006418691.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene798.p Protein 5e-37 43
Aeqsu_2216 YP_006418691.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene598.p Protein 2e-38 42