Gene Information

Name : Aeqsu_1556 (Aeqsu_1556)
Accession : YP_006418056.1
Strain : Aequorivita sublithincola DSM 14238
Genome accession: NC_018013
Putative virulence/resistance : Resistance
Product : cystathionine beta-lyase/cystathionine gamma-synthase
Function : -
COG functional category : -
COG ID : -
EC number : 4.4.1.1
Position : 1662020 - 1663168 bp
Length : 1149 bp
Strand : -
Note : PFAM: Cys/Met metabolism PLP-dependent enzyme

DNA sequence :
ATGAGTATGAAATTCAACACTAAAACGATACACGGCGGCCAGCACAATGTAGATCCTGCTTTCGGCGCTGTGATGCCACC
AATTTATCAAACCTCAACCTATTCGCAAACTACGCCCGGAGGTCATAAAGGTTTTGAATATTCCAGAAGTGGTAACCCAA
CGCGTGCAGCTTTGGAGCGAGCATTCGCCAGTCTTGAAAATGGTGAATTCGGTCTTGCCTTCGGAAGTGGTCTCGCAGCG
ATTGATGCTGTTATAAAACTTTTAAAACCGGGCGACGAGGTAATTTCAACCAACGATCTTTACGGTGGAACATATCGGTT
ATTTACGAAGATTTTTGAAGGTTTCGGCATCAAGTTTCATTTCGTCGGAATGGAAAACGCTGAAAAAATTGAAGATTATG
TTAATGATAAAACAAAACTGATTTGGGTAGAAACACCAACCAACCCAATGATGAACATTATTGACATCAAGAAAGCAGCC
TCTATTGCCAAAAAACACAAAGTTTTGCTTGCGGTTGACAATACTTTTGCAACTCCCTATTTGCAGCAACCCTTGGAAAT
GGGCGCAGATATTGTGATGCACAGCGCCACAAAATATCTTGGCGGCCATAGTGATGTGGTTATGGGTGCTTTGATTGTGA
AAGACAAAGACCTTGCAGAAAAATTATATTTCATCCAAAATGCAAGCGGTGCCATTTGCGGACCGCAAGACTGTTTCTTG
ATTCTTCGTGGTTTGAAAACCCTTCATATCCGCATGCAACGTCATTGCGAAAACGGAAAAGCTATTGCCGAATATTTAGC
AAATCATCCGAAAATCGAAAAAGTATATTGGCCTGGTTTTGAAAACCATCCCAATCATTCAATTGCTAAGGCACAGATGA
AGGGTTTTGGTGGAATGATTTCATTTGTAATTAAAGGAAGCAATTATAAACAAGCCATCAAAATAGTTGAAAATCTAAAA
ATATTCACTTTAGCTGAAAGTCTAGGTGGTGTGGAAAGTCTTGCCGGACATCCCGCAAGTATGACACATGCTAGTATTCC
GAAAGAAGAACGTGAAAAAACAGGGATTGTAGATTCGTTAATTCGTCTTTCTGTTGGTATTGAAGATGTGGAAGATTTAA
TTGCAGATTTAGAGCAAGCGATTGGATAA

Protein sequence :
MSMKFNTKTIHGGQHNVDPAFGAVMPPIYQTSTYSQTTPGGHKGFEYSRSGNPTRAALERAFASLENGEFGLAFGSGLAA
IDAVIKLLKPGDEVISTNDLYGGTYRLFTKIFEGFGIKFHFVGMENAEKIEDYVNDKTKLIWVETPTNPMMNIIDIKKAA
SIAKKHKVLLAVDNTFATPYLQQPLEMGADIVMHSATKYLGGHSDVVMGALIVKDKDLAEKLYFIQNASGAICGPQDCFL
ILRGLKTLHIRMQRHCENGKAIAEYLANHPKIEKVYWPGFENHPNHSIAKAQMKGFGGMISFVIKGSNYKQAIKIVENLK
IFTLAESLGGVESLAGHPASMTHASIPKEEREKTGIVDSLIRLSVGIEDVEDLIADLEQAIG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 4e-84 51
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 5e-83 51
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 2e-61 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Aeqsu_1556 YP_006418056.1 cystathionine beta-lyase/cystathionine gamma-synthase BAC0207 Protein 2e-69 45