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Name : Thivi_0988 (Thivi_0988) Accession : YP_006413148.1 Strain : Thiocystis violascens DSM 198 Genome accession: NC_018012 Putative virulence/resistance : Virulence Product : chaperone ATPase Function : - COG functional category : - COG ID : - EC number : - Position : 1076839 - 1079322 bp Length : 2484 bp Strand : + Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA) DNA sequence : ATGATCCAGAACATCAACCAACTCAGTACCCTGCGCGTGATGCAGACGTTCGAAACGGCGGTGAACGAGCTGGTCGCGCT GCGCCAGAATCTGCTGACCACGGATGTCCTGCTGATGGCGCTGATCTCGCAGGAGGATGCGGAGCCCCTGCGCATCCTGG AACAACTGTTGTCGAATCCGGCGCAGGCGGTGGCGCGAATCCGCGACCGGGTGCGGGAACATTATCGCGCGGCCGTTCCC ACCGCCGGGAATCAGATCCTCATCAGTCAGGAGATCGAGCAGGCGGTGCGGATCGCCCGCGCGGAGGCGAAACGGCTCGG CGACAGTCTCATCACGACCGGCACCCTGTTCCTGGCGCTCTTCGATGCGCACTGCGGACCGACCGCGACGCTCTTGAGCG AGGCCGGGATCGGACTCGACGAGGCGCGCAAGGCGCTGGAGACGCTGCGCGGTGGGCGCACCGTCACCGCCGCCGAGGCC GAGAGCGAGCCGGACGTGCTGGCGCGCTACACCCGCGACCTCACCGAACTGGCGCGCCGGCACGAGCTGGATCCGGTGAT CGGGCGCGAGGACGAGATCGCCCAGGTGATCCAGACGCTGTCACGGCGCAAGAAGAACAACCCGGCCCTGATCGGCGAGG CCGGGGTGGGCAAGACCGTGATCGTCGAGGGTCTGGCGCAGCGCATCGCCGATGCCGAGGTGCCCGATACCCTGCTGAAC AAGCGTCTACTGGCGCTGGACATGGGCGACATCATCGCCGGCGCCAAGATGCGCGGCGAACTCGAAGAGCGGCTGAAGTC GGTGCGCGACGCGGTGATCGAGGCCAAAGGTCGAGTGATCCTCTTTATCGACGAGTTGCATACCGTGATGGGCATGGGCG GGGGCGCGGGTTCCGGCACCCTGGATGCGCCGAGCATGCTGAAGACGGCGCTAGCGCAGGGGTCGCTGCAAGTCATCGGC GCCGATACCACGGAGGAATATCGCCGTTTTATCGAGAGCGACAAGGCGCTGGAGCGACGCTTTCATCCGATTCTGGTGCG CGCGCCATCGATCCCGGACACCATCCGCATCCTCCAGGGGATCGCGCCCCGCTATGAATCCCATCATCAAATCCACTATC TGCCCGAGGCGCTGGAGGCGGCGGCCCAGCTTGCCGATCGCTATCTGACCGAGCGCCAGTTGCCGGACAAGGCCATCGAT CTGCTCGACGAGGCCGGCGCCCACAAGCATCTGCATCGCATCTCGATCCCGGCCGATATCCGCGACCTGGAGCGCGCGCA TCGCAACCTGCTGCGCGAGAAGACCGACGCCTTCAACCAGCAGCATTTCGAGCAGGCGGCGCGTCTACAGATGGAGATCC TGGCGCTGGAGGAACGTCTGTCGGCCGCGCGCGCCACCTGGGAAGCGCAGCGCGAACAGGAGGAAACGGACGTGCGCGGC GAGGACATCGCGCGGGTCGTCTCGCGCTGGACCGGAATCCCGGTGGCGCGGATGGTGGAATCCGAGTCGGACAAACTGTC GCGCATGGAAACCGAGCTGCACCGGCGGATCGTCGGTCAAGACGACGCCGTGCGCGCGGTCGCCAACGCCATCCGCCGCA ACCGTGCCGGGATCGCGGCGGCGCGTCGGCCGATCGGTTCCTTCCTCTTTCTCGGACCGACCGGCGTCGGCAAGACCGAA TTGGCCAAGGCGCTGGCCGCCTTCCTGCTCGACGACGAGAGCCGCGTGGTGCGGCTCGACATGTCCGAGTACATGGAGCG CCACGAGGTCTCCAAGATGATCGGCGCGCCGCCGGGCTACATCGGCTACGGCCAGGGCGGACAGCTTACCGAACGGGTCC GGCGTAATCCCTATACCGTCGTGCTGCTCGACGAGATGGAAAAGGCGCATCCGGATGTCTTCAACATGCTGCTGCAGATC CTGGAGGATGGCCGACTGACCGACGCCGAGGGCCGGACCGTGTCCTTCCGCAACACCATCCTGATCGGCACCTCCAATCT GGGCACCGAGTCGCTGTCGCCGGACAAGCGCCCGATCGGCTTCATCCATTCCGCCACGCCCGACGATGCCGAGGCCCGCT CGCTGGTCATGCACGAGGTCAAGCGCTTCTTCAAGCCGGAGCTGCTGAATCGTCTCGACGATGTCATTGTCTTTCATTAC CTGGAGCCCGAGGAAGTGCATCGCATCGCCGGAATTTTCGTCGATGCGCTGATCCAACGTCTGGCGGTGCGCCGGATCGA GGTCGTCGTCGAGCCGGCGGTGATCGACAAACTCGCTCGGGACGGTTTCGATCCGATCTATGGCGCGCGCCCACTGCGCC GCGAAGTCGAGCGCCAACTGGAAAACCCGCTGGCCATGCTGATCGTCACCGGCCAGTGTCCGGATGGGAGCCGGGTCCAG GTTGGGCTCGATGATCAGGGGATCGCGCTGCGGGTCGATCCTGCCGCAGCCGGTGGAGAGTCACCGCATGAAAACACGCA CTGA Protein sequence : MIQNINQLSTLRVMQTFETAVNELVALRQNLLTTDVLLMALISQEDAEPLRILEQLLSNPAQAVARIRDRVREHYRAAVP TAGNQILISQEIEQAVRIARAEAKRLGDSLITTGTLFLALFDAHCGPTATLLSEAGIGLDEARKALETLRGGRTVTAAEA ESEPDVLARYTRDLTELARRHELDPVIGREDEIAQVIQTLSRRKKNNPALIGEAGVGKTVIVEGLAQRIADAEVPDTLLN KRLLALDMGDIIAGAKMRGELEERLKSVRDAVIEAKGRVILFIDELHTVMGMGGGAGSGTLDAPSMLKTALAQGSLQVIG ADTTEEYRRFIESDKALERRFHPILVRAPSIPDTIRILQGIAPRYESHHQIHYLPEALEAAAQLADRYLTERQLPDKAID LLDEAGAHKHLHRISIPADIRDLERAHRNLLREKTDAFNQQHFEQAARLQMEILALEERLSAARATWEAQREQEETDVRG EDIARVVSRWTGIPVARMVESESDKLSRMETELHRRIVGQDDAVRAVANAIRRNRAGIAAARRPIGSFLFLGPTGVGKTE LAKALAAFLLDDESRVVRLDMSEYMERHEVSKMIGAPPGYIGYGQGGQLTERVRRNPYTVVLLDEMEKAHPDVFNMLLQI LEDGRLTDAEGRTVSFRNTILIGTSNLGTESLSPDKRPIGFIHSATPDDAEARSLVMHEVKRFFKPELLNRLDDVIVFHY LEPEEVHRIAGIFVDALIQRLAVRRIEVVVEPAVIDKLARDGFDPIYGARPLRREVERQLENPLAMLIVTGQCPDGSRVQ VGLDDQGIALRVDPAAAGGESPHENTH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 4e-122 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Thivi_0988 | YP_006413148.1 | chaperone ATPase | VFG0079 | Protein | 4e-145 | 46 |
| Thivi_0988 | YP_006413148.1 | chaperone ATPase | VFG0080 | Protein | 2e-112 | 46 |
