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Name : Thivi_0925 (Thivi_0925) Accession : YP_006413085.1 Strain : Thiocystis violascens DSM 198 Genome accession: NC_018012 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.11 Position : 1008926 - 1010203 bp Length : 1278 bp Strand : - Note : PFAM: Seryl-tRNA synthetase N-terminal domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: seryl-tRNA synthetase DNA sequence : ATGCTAGATCCACGTTTATTGCGGACCGATCTCGACCGCGTCGCCGAGCAGTTGGCCCGGCGCGGCCTGATCCTGGACAA ATCGCGTTTCGAGGCGTTGGAAGCGGAACGCAAGAGCTTGCAGATCGCGGTTCAGGAATTGCAAAACCAGCGCAACACCC GCTCCAAGACGATCGGTCAGGCCAAGGCGTCCGGGCAGGATATTCAACCCCTGTTGGCCGAGGTGTCCGACCTTGGCGAA CGACTCAAGGCCGCCGATGCGCGTCTGAGCGAGATTCAGCAGGAGGTCGGCGCCATCAGCCTGGCTCTGCCCAATCTGCC CGACGCGAGCGTCCCCGACGGTCGGAACGAAGCGGACAACCGCGAGGAACGGCGTTGGGGCGAACCGCCGGTCTTCGACT TTGCTCCCAAGGATCATGTCGACCTGGGCGCGGTCAACGGCTGGATGGATTTCGATCTGGCGGCCAAGGTCACCGGCTCG CGTTTCGTGGTGCTCTCCGGCCCGCTGGCCCGGCTGCATCGGGCGCTGATCCAGTTCATGCTCGACACTCACACCGGCGA ACACGGCTACACCGAGACCTACGTCCCCTATCTGGTCAATGCCGAGAGTCTCCAGGGCACGGGGCAGTTGCCCAAATTCG AGGCGGATCTGTTCAAGGTGCCGGGCGAGAAGACGCTCTATCTCATCCCCACCGCCGAGGTGCCGGTCACCAACCTGGCG CGCGACGTGATTTTCGAGGCCGCCGATCTGCCGCGCAAATGGGTCGCGCATACGCCCTGTTTTCGCAGCGAGGCGGGTTC CTACGGCAAGGACACGCGCGGCATGATCCGCCAGCATCAGTTCGAGAAGGTGGAACTGGTCCAGGTCACGCGCCCCGAGG AGTCGCTCCAGGCGCTCGAAGCGCTCACCGGCCATGCCGAAACCATCCTGCAACGGCTGGGACTGGCCTATCGGGTGGTG ACGCTCTGCACCGGCGATCTGGGCTTCTCCGCGCGCAAGACCTACGACCTGGAAGTCTGGCTCCCCGGTCAGCAGACCTA TCGCGAAATCTCCTCGTGCAGCAATTTCGGCGACTTCCAGGCACGCAGACTCCAGGCGCGCTGGCGCAATCCCGAAACCG GCAAGCCCGAGCTGGTCCACACCATCAATGGTTCTGGGCTGGCGGTCGGGCGTACCCTGGTCGCCGTGCTGGAGAACTAT CAGCAGGCAGACGGCGGCATCGGCATTCCGGAAGCGCTGCGGCCCTACATGGGCGGTCTGGAGCGGCTCGGCGTCTAA Protein sequence : MLDPRLLRTDLDRVAEQLARRGLILDKSRFEALEAERKSLQIAVQELQNQRNTRSKTIGQAKASGQDIQPLLAEVSDLGE RLKAADARLSEIQQEVGAISLALPNLPDASVPDGRNEADNREERRWGEPPVFDFAPKDHVDLGAVNGWMDFDLAAKVTGS RFVVLSGPLARLHRALIQFMLDTHTGEHGYTETYVPYLVNAESLQGTGQLPKFEADLFKVPGEKTLYLIPTAEVPVTNLA RDVIFEAADLPRKWVAHTPCFRSEAGSYGKDTRGMIRQHQFEKVELVQVTRPEESLQALEALTGHAETILQRLGLAYRVV TLCTGDLGFSARKTYDLEVWLPGQQTYREISSCSNFGDFQARRLQARWRNPETGKPELVHTINGSGLAVGRTLVAVLENY QQADGGIGIPEALRPYMGGLERLGV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 9e-98 | 55 |
