Gene Information

Name : Thivi_0850 (Thivi_0850)
Accession : YP_006413013.1
Strain : Thiocystis violascens DSM 198
Genome accession: NC_018012
Putative virulence/resistance : Virulence
Product : response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 921353 - 921973 bp
Length : 621 bp
Strand : +
Note : PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family

DNA sequence : 
ATGACAACCGATGCGACCGTTTTCGTCGTCGACGACGACCAAGCCATGCGAACCTCGCTGCAATGGCTGATCGAATCGAC
TGGCCTGTCGGTGCAGACGTATGAGTCCGCCGACGTGTTTCTCGCCAGCCATTATCCAGGCCGCCCCGGCTGTCTGCTGC
TGGACGTGCGGATGCCCGGCATGAGCGGACTGGAACTGCAAGGCTATCTGATGCGTCAGGGGTATCGACTGCCGGTCATC
CTCATCACCGGCCATGGAGACGTGGCGATGGCAGTCAAGGCCATGAAGGCGGGGGCGGTGGATTTCATCGAAAAACCCTT
CCACGACGAGGATCTGCTGCGCAGCATCCGCAACGCGCTGGAGTTCGACCAGAAGCATCGGGCCAGCCGCTCCGCGAAGG
CCGACATCGCCATGCGTCTGGCCGAGCTGACTCCGCGCGAGCACGAGGTCATGGCCATGGTCACCGACGGAAAATCCAAC
CGGGAGATTGCGGCGGCGCTCGGGGTCAGTTCCAAAACCGTGGAGGCCCACCGGGCGCGCGTGATGGAAAAGATGCGCGC
CGAGTCGCTGGCGGAGCTGGTACGGATGGCCTTGCTGGTCGCGGTCGATTCGCCGCTTTGA

Protein sequence : 
MTTDATVFVVDDDQAMRTSLQWLIESTGLSVQTYESADVFLASHYPGRPGCLLLDVRMPGMSGLELQGYLMRQGYRLPVI
LITGHGDVAMAVKAMKAGAVDFIEKPFHDEDLLRSIRNALEFDQKHRASRSAKADIAMRLAELTPREHEVMAMVTDGKSN
REIAAALGVSSKTVEAHRARVMEKMRAESLAELVRMALLVAVDSPL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 3e-18 44
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 3e-18 44
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 3e-18 44
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 2e-18 44
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 4e-18 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thivi_0850 YP_006413013.1 response regulator VFG0488 Protein 1e-18 44