Gene Information

Name : Thivi_0083 (Thivi_0083)
Accession : YP_006412295.1
Strain : Thiocystis violascens DSM 198
Genome accession: NC_018012
Putative virulence/resistance : Unknown
Product : K+-transporting ATPase, KdpA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 91284 - 93008 bp
Length : 1725 bp
Strand : -
Note : PFAM: Potassium-transporting ATPase A subunit; TIGRFAM: K+-transporting ATPase, KdpA

DNA sequence :
ATGACGCCGCATGCCTGGATGCTTCTTGGGCTTTACCTGCTCGTGCTCCTGCTCGCGGCCAAGCCGCTGGGCAGCTACAT
CGCGGCGGTGATGGAGGGGCGCCCGATCCTGGCGCTGCGGCTCGGCGGCGGTCTCGAATCGCTGCTGTATCGCCTGTGCG
GGGTGCGCCAGAACAAGGAAATGGGTTGGCTGCACTACGCGCTGGCCATCCTGCTGTTCAACCTGCTCGGTGCGCTGGCC
GTCTATGCCCTGCAACGGCTGCAAGTCTGGCTGCCGCTCAATCCCCAGCAACTCGCCAACGTCAGCCCGGATTCGGCCTT
CAACACCGCCATCAGCTTCGCCACCAATACCAACTGGCAGGGCTATGCGGGCGAATCGACCATGGGCCATCTCACCCAGA
TGCTGGGTCTCGCGGTGCAGAACTTCCTCTCGGCCGCCACCGGCATCGCGGTCGCCGTGGCCCTGATGCGCGGTTTCGCC
CGGCATTCGGCCAGCACCATCGGCAATGCCTGGGTCGATCTGACCCGCGTCACACTCTATCTGCTGCTGCCGATCGCGCT
GGTCTACGCCGTCTTTCTGGTCAGTCAGGGGACGATTCAGACGCTCGACGGCTACCAGGAGGTGACGACGCTGGAGTCCG
GTCCCGCCACGGCGGCGCCACAAACACAGACCCTGCCGACGGGTCCAGTCGCCTCGCAGGAGGCGATCAAGATGCTCGGC
ACCAACGGTGGCGGCTTCTTCAACGCCAACTCGGCGCACCCCTACGAGAACCCGACGCCCCTGACCAATATCATCCAGAT
GCTCTCGATCTTCCTGATCCCGGCGGCGCTCTGTCTTACCTTTGGGCGGATCGTCGGCGATGTCCGTCAGGGCTGGGCGG
TGCTGGCGGCCATGACGGTGCTCTTCGTCGTCATGGCGGTGGTGGCGATGAGCGTCGAGCAGCAGTCCAACCCACTGTTG
ACCAGCCTGGGTATCGACGGCTCGGCGGGCAATCTGGAAGGCAAGGAGACGCGCTTCGGCAGCGCCGAATCGGGCCTCTT
TGCGACCATTACCACGCTCGCCTCCTGCGGGGCGGTCAATGCCATGCATGATTCATTCATGCCACTGGGCGGCTTCGTGA
CCCTCTGGAACATGATGCTCGGCGAGGTCGTCTTCGGCGGCGTTGGCACCGGGCTCTATGGCATGCTGGTGTTCGCGGTC
ATGGCCGTGTTTCTGGCCGGACTCATGATCGGGCGCACCCCGGAATATCTGGGCAAGAAGATCGAGGCCCACGACATCAA
GATGGTCTCGCTCGCCATCCTGGTGACGCCGCTGCTGGTCCTGACCGGCACCGCGCTGGCCGTGACGCTGCCCGCCGGGG
TGGCCGGGGTCGCCAATCCCGGCGCACATGGCTTCGCGGAGATCCTCTACGCCTTCACCTCGGCGGCCAACAATAACGGC
AGCGCCTTCGCCGGACTCTCGGCCAACACGCCCTTCTACAACGTCCTGCTGGGCATCGCCATGTGGTTCGGACGTTTCAT
TGTGATCGTGTCGGTTCTGGCGCTGGCCGGGAACCTCGCGGCCAAGAAGCGCATCGCCGCCAATGCCGGCACCATGCCGA
CCCATGGTCCGCTGTTCGTGATGCTGCTGATCGGCACCGTGGTGCTGGTCGGCGCACTCAACTATGTCCCGGCGCTTGCA
CTCGGGCCGGTGGTCGAGCAACTCATGCTCCAGTCGGCGCATTGA

Protein sequence :
MTPHAWMLLGLYLLVLLLAAKPLGSYIAAVMEGRPILALRLGGGLESLLYRLCGVRQNKEMGWLHYALAILLFNLLGALA
VYALQRLQVWLPLNPQQLANVSPDSAFNTAISFATNTNWQGYAGESTMGHLTQMLGLAVQNFLSAATGIAVAVALMRGFA
RHSASTIGNAWVDLTRVTLYLLLPIALVYAVFLVSQGTIQTLDGYQEVTTLESGPATAAPQTQTLPTGPVASQEAIKMLG
TNGGGFFNANSAHPYENPTPLTNIIQMLSIFLIPAALCLTFGRIVGDVRQGWAVLAAMTVLFVVMAVVAMSVEQQSNPLL
TSLGIDGSAGNLEGKETRFGSAESGLFATITTLASCGAVNAMHDSFMPLGGFVTLWNMMLGEVVFGGVGTGLYGMLVFAV
MAVFLAGLMIGRTPEYLGKKIEAHDIKMVSLAILVTPLLVLTGTALAVTLPAGVAGVANPGAHGFAEILYAFTSAANNNG
SAFAGLSANTPFYNVLLGIAMWFGRFIVIVSVLALAGNLAAKKRIAANAGTMPTHGPLFVMLLIGTVVLVGALNYVPALA
LGPVVEQLMLQSAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpA NP_814333.1 potassium-transporting ATPase subunit A Not tested Not named Protein 2e-74 46
ef0087 AAM75290.1 EF0087 Not tested Not named Protein 1e-74 46
kdpA YP_251948.1 potassium-transporting ATPase subunit A Not tested SCCmec Protein 5e-57 45
kdpA YP_190030.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 3e-57 44
unnamed BAB43902.1 potassium-transporting ATPase(A chain) Not tested Type-II SCCmec Protein 2e-57 44
SAR0070 YP_039538.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 3e-57 44
truncated-kdpA NP_370596.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 3e-57 44
kdpA NP_373308.2 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 3e-57 44