|
Name : Thivi_0082 (Thivi_0082) Accession : YP_006412294.1 Strain : Thiocystis violascens DSM 198 Genome accession: NC_018012 Putative virulence/resistance : Unknown Product : K+-transporting ATPase subunit B Function : - COG functional category : - COG ID : - EC number : - Position : 89202 - 91268 bp Length : 2067 bp Strand : - Note : PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: K+-transporting ATPase, B subunit; ATPase, P-type (transporting), HAD superfamily, subfamily IC DNA sequence : GTGGCCCGTAAGACACTATCCATGTTCGATCCGGCCCTGCTGTGGCCGGCCGTTCTCGATGCCTTCCGCAAGCTGAACCC GGCGGCGCAGTGGCGCAATCCGGTGATGTTCGTGGTCTATGCCGGCTGCCTCCTGACCACCGCGCTTTGGGTGCAGGCGC TCACCGGGACCGGCGAGGCCCCGGCCGGATACATCCTCGCCGTCACCCTCTGGCTGTGGTTCACGGTGCTCTTCGCCAAC TTCGCCGAGGCGCTGGCCGAAGGTCGCAGCAAGGCGCAGGCCGCCTCGCTGCGCGGCTTGAAGCGCGAGACAATGGCCAA AAAGCTCAAGTCAGCCGACGCGAACGCCGACTGGTCGTCGGTCCCCGCCACCGAACTGCGCAAGGGTGATCTGGTGCTGG TACAGGCGAACGACACCATCCCCGCCGACGGCGAGGTCATCGAAGGCGTCGCCTCGGTCGATGAGTCCGCGATCACGGGC GAGTCCGCGCCGGTCATTCGCGAGGCCGGGGGCGATTTCTCGGCGGTGACGGGCGGGACGCGCGTGCTGTCCGACTGGCT GCTGGTGCGGGTGACGGTCAATCCCGGTGAGACCTTCGTTGATCGCATGATCGCGATGGTCGAGAACGCCAGGCGCAGGA AGACCCCGAACGAGATCGCGCTGACCATCCTGCTGGTCGCGCTCACCATCATCTTCCTGGTGGTCACGGTGACCCTGCTG CCCTTTTCGATCTTCGGCGTTCAGGCCGCCGGGGCGGGCACGCCGGTAGCCCTGACGACACTCATCGCACTCCTGGTCTG TCTGATCCCGACGACGATTGCCGGTCTGCTCTCGGCCATCGGCGTGGCCGGCATGAGCCGGATGATGCAGGCCAATGTCA TCGCCACCTCCGGGCGCGCGGTCGAGGCCGCTGGTGATGTCGATGTGCTGCTGCTGGACAAGACCGGCACCATCACCCTG GGCAATCGTCAGGCCGCCGCCTTCCTGCCCGCCGAGGGCGTGCCCGAGCGGGATCTGGCAAGCGCGGCCCAACTGGCCTC GCTCGCCGATGAGACGCCGGAGGGCCGCAGCATCATGGTGCTGGCGAAACAGCGATTCGGCCTGCGCGAGCGCGACATCC AGGCGCTGAACGCGCAGTTCATCCACTTCTCCGCCCACACCCGCATGAGCGGGGTCGATCTGCCGGGCAGTCAGATCCGC AAGGGCGCCGTCGATGCCATCCGCGCGCACATCGAGACGCTCGGCGGACGTTTTCCGCCGGGGGTGCTCCGCGCCGTCGA GGAGGTCGCCCGCCGTGGCAGCACGCCGCTGGTGGTCGCGGACGGCAGCCGCGTGCTGGGTGTCGTCGAGCTGAAGGACA TCGTCAAGGGCGGGATCAAGGAACGTTTCGCCGAGCTGCGCCGCATGGGCATCCGCACCATCATGATCACCGGCGATAAC CCGCTCACCGCCGCCGCCATCGCCGCCGAGGCGGGGGTCGATGACTTCCTCGCCGAGGCCACGCCGGAGGCCAAGCTGGC CCTGATCCGCCAGCATCAGGCCGAGGGCCGGCTGGTCGCCATGACCGGCGACGGCACCAACGACGCCCCGGCGCTCGCTC AGGCCGATGTCGCGGTCGCCATGAACACGGGGACTCAGGCCGCGAAGGAGGCCGGCAACATGGTCGATCTCGATTCCAAT CCGACCAAGCTGATCGAGGTCGTCGAGACCGGCAAGCAGATGCTGATGACGCGCGGCGCATTGACCACCTTCAGCGTCTC GAACGACATCGCCAAATATTTCGCCATCATCCCGGCGGCCTTCGTGACCACTTACCCGCAACTGGGCGCGCTCAACGTCA TGGGGCTCGCCAGCCCGACCTCGGCGATCCTCTCGGCGGTCATCTTCAACGCGCTCATCATCATCGTCCTGATCCCGCTG GCGCTGAAGGGCGTGACCTACCAGCCGATGGGCGCCGCCGTGCTGCTGCGCCGCAATCTGGCGATCTATGGTCTGGGCGG TCTGATCGCGCCCTTCATCGGCATCAAGCTGATCGACCTGACCATCGCCGCCACCGGACTTGCCTGA Protein sequence : MARKTLSMFDPALLWPAVLDAFRKLNPAAQWRNPVMFVVYAGCLLTTALWVQALTGTGEAPAGYILAVTLWLWFTVLFAN FAEALAEGRSKAQAASLRGLKRETMAKKLKSADANADWSSVPATELRKGDLVLVQANDTIPADGEVIEGVASVDESAITG ESAPVIREAGGDFSAVTGGTRVLSDWLLVRVTVNPGETFVDRMIAMVENARRRKTPNEIALTILLVALTIIFLVVTVTLL PFSIFGVQAAGAGTPVALTTLIALLVCLIPTTIAGLLSAIGVAGMSRMMQANVIATSGRAVEAAGDVDVLLLDKTGTITL GNRQAAAFLPAEGVPERDLASAAQLASLADETPEGRSIMVLAKQRFGLRERDIQALNAQFIHFSAHTRMSGVDLPGSQIR KGAVDAIRAHIETLGGRFPPGVLRAVEEVARRGSTPLVVADGSRVLGVVELKDIVKGGIKERFAELRRMGIRTIMITGDN PLTAAAIAAEAGVDDFLAEATPEAKLALIRQHQAEGRLVAMTGDGTNDAPALAQADVAVAMNTGTQAAKEAGNMVDLDSN PTKLIEVVETGKQMLMTRGALTTFSVSNDIAKYFAIIPAAFVTTYPQLGALNVMGLASPTSAILSAVIFNALIIIVLIPL ALKGVTYQPMGAAVLLRRNLAIYGLGGLIAPFIGIKLIDLTIAATGLA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 7e-175 | 63 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 5e-175 | 63 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 3e-135 | 54 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 2e-134 | 54 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 3e-134 | 54 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 3e-134 | 54 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 3e-134 | 54 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 3e-134 | 54 |
