Gene Information

Name : Thivi_0536 (Thivi_0536)
Accession : YP_006412721.1
Strain : Thiocystis violascens DSM 198
Genome accession: NC_018012
Putative virulence/resistance : Virulence
Product : UDP-glucose pyrophosphorylase
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.7.9
Position : 561890 - 562762 bp
Length : 873 bp
Strand : +
Note : PFAM: Nucleotidyl transferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase

DNA sequence :
ATGGCAAAGATTCGTAAGGCAGTATTTCCAGTGGCTGGACTTGGGACGCGGTTTCTGCCGGCCACCAAGGCCAGTCCGAA
GGAAATGATGCCGGTTGTCGACAAGCCACTGATCCAATACGCCGCCGAAGAGGCCGAGGCGGCGGGCGTGGATCAGTTGG
TGTTCATTACCGGGCGGAGCAAACGCTCCATCGAGGACCATTTCGATAAAGCCTACGAGCTTGAGGCAGAACTCGAAAGC
GCGGGCAAGCAGGATCTGCTGCGCATCGTGCGCGGCGTGCTGCCGGCACTGGCCACCTGCATCTATGTTCGCCAGGCCGA
GGCATTGGGTCTGGGGCATGCGGTGCTGTGCGCCAAGCCGGTGATCGGCGACGAAGCCTTCGCGGTGCTCCTTGCCGACG
ACCTTATTCACAGTCCCGCCAAGGGTGTGGTCGAGCAGATGGCGGATGTCCATGCGCGCTATGGCTGTAGCGTGCTCAGC
GTCCAGGAAGTGCCGCGCGAGGAAACCCATAAATACGGCATCGTGAAAGTCGAGAAAGGGCGCAACGGCGAGTTGCGGGT
CGTCTCCATCGTCGAAAAACCGGCGCCTGCGGACGCCCCCTCGAATCTGGCGGTGGTCGGGCGTTATCTGCTTACGCCCA
GGATTTTCGATAAACTCGAAAACACCCGCGAAGGCGCCGGCGGCGAGATCCAACTGACCGACGGCATCTCCGATTTGCTC
CAGGACGAGCACGTCATCGCGCATCCCTTCGAGGGCAAGCGCTATGACTGCGGCAGCAAGCTGGGATATCTGCAGGCGAC
GGTGGAATATGGTCTCGCGCATCCCGAGCTTGGCGAGCGGTTTTCGGCCTATCTGCGCGCGTTTGGGCAGTAG

Protein sequence :
MAKIRKAVFPVAGLGTRFLPATKASPKEMMPVVDKPLIQYAAEEAEAAGVDQLVFITGRSKRSIEDHFDKAYELEAELES
AGKQDLLRIVRGVLPALATCIYVRQAEALGLGHAVLCAKPVIGDEAFAVLLADDLIHSPAKGVVEQMADVHARYGCSVLS
VQEVPREETHKYGIVKVEKGRNGELRVVSIVEKPAPADAPSNLAVVGRYLLTPRIFDKLENTREGAGGEIQLTDGISDLL
QDEHVIAHPFEGKRYDCGSKLGYLQATVEYGLAHPELGERFSAYLRAFGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0059 YP_300149.1 UTP-glucose-1-phosphate uridylyltransferase Not tested SCC15305cap Protein 5e-62 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thivi_0536 YP_006412721.1 UDP-glucose pyrophosphorylase VFG0964 Protein 4e-66 46