Gene Information

Name : Thivi_3810 (Thivi_3810)
Accession : YP_006415777.1
Strain : Thiocystis violascens DSM 198
Genome accession: NC_018012
Putative virulence/resistance : Resistance
Product : SSS sodium solute transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4150466 - 4152187 bp
Length : 1722 bp
Strand : -
Note : PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family

DNA sequence :
ATGAAGCGCTTCGCGATCTGGGGCGTCCTGCTCGCCCTGCTGACCCCCTTCATGCTCGTGGCCGCGCCAGCACTTTCCGG
CGCCGTCGAGCAACAGTCGGTGAACATGACGGCCATCTACATGTTCGTCGCGTTCGTCGCGGCAACCCTGGGCATCACCT
ACTGGGCGGCCAAGCGCACCCGTACCGCCAAGGAGTTCTATACCGCGGGCGGCGGCATCACCGGCTTCCAGAACGGTCTG
GCCATCGCCGGCGACTACATGTCCGCCGCCTCCTTCCTGGGCATCTCCGGCCTGGTGTTCGCCTCCGGCTACGACGGTCT
GATCTACTCCATCGGCTTCCTGGTCGGCTGGCCGATCATCATGTTCCTGATCGCCGAGCAGATCCGTAACCTGGGCAAGT
TCACCTTCGCCGACGTCTCCTCCTACCGCTTCGGTCAGACCCAGATCCGCACCATGGCGGCGATCTCCTCGCTGGTCGTG
GTCGCCTTCTACCTGATTGCGCAGATGGTCGGCGCCGGTAAGCTGATCCAGCTTCTGTTCGGTCTGGAGTATTGGATGGC
CGTGGTCATCGTCGGCGTCCTGATGATGGTCTATGTGATCTTCGGCGGCATGACCGCCACCACCTGGGTGCAGATCATCA
AGGCGGTGCTGCTGCTGTGCGGCGCGACCTTCATGGCGGTCGCGGCGCTGTCAGCCTTCAATTTCTCCCCCGAGGAGATG
TTCCGGCAGGCGGTCGAGACGCATCCCAAGGCTGGCGCCATCATGTCGCCCGGCTCGCTGGTGACGGACCCGATCAACGC
CATCTCGCTCGGCCTGGCGCTCATGTTCGGCACCGCCGGTCTGCCGCATATCCTGATGCGCTTCTTCACCGTGCCGGATG
CCAAGGAGGCGCGTAAATCGGTCTTCTACGCCACCGGTTTCATCGGCTATTTCTACATCCTGACCTTCATCATCGGCTTC
GCGGCCATCGTGCTGCTAGCTCAAAACCCAGAGTTCTTCAAGCCGGCGGCGCTAGCGGCGGATGGCTCGGTCATCCAGGG
TCAGCTTGTCAGCGGAATCAATGGCGGAACCAATATGGTCGCCATCCATCTGGCCAAAGCGGTCGGCGGCGATCTCTTCC
TCGGCTTCATCTCGGCCGTGGCCTTCGCCACCATCCTCGCCGTGGTCTCGGGTTTGACTTTGGCCGGCGCCTCCGCCATC
TCGCATGACCTCTACGCCAGCGTGATCGCGCGCGGTCGCAGCAACGAGACCACCGAAATCCGCGTCTCCAAGTTCGCCAC
CTTCGGTCTGGGACTGGTCGCCATTGGGCTGGGCATCGCCTTCGAGAGTCAGAACGTCGCCTTCATGGTGGGTCTGGCCT
TCGCGATCGCGGCGAGCGCCAACTTCCCGGTGCTGGTCGCCTCCATCTTCTGGAGCAAGATGACCACGCGCGGCGCGCTG
ATCGGCGGTTTCGCCGGACTCATCAGCGCCTTTGTGTTGACGGTCATGTCGAAAGCGGTGTGGGGCGACGTGCTCGGCCA
CGTGGGCGAGGACGGCAAGTCGGTCGGCCTGATCATGCTGAACAACCCGGCGATCGTCTCGATCCCGATCTCCTTCGCCT
GTATCTGGCTGTTCTCGATTTTCGACAACTCCGAGCGCGCCAAAATCGATCGGGCCGCTTTCGATGCACAGCGGATCCGT
TGCGAGACGGGTATTGGTGCCGAGGGAGGCGCAAGCCACTAA

Protein sequence :
MKRFAIWGVLLALLTPFMLVAAPALSGAVEQQSVNMTAIYMFVAFVAATLGITYWAAKRTRTAKEFYTAGGGITGFQNGL
AIAGDYMSAASFLGISGLVFASGYDGLIYSIGFLVGWPIIMFLIAEQIRNLGKFTFADVSSYRFGQTQIRTMAAISSLVV
VAFYLIAQMVGAGKLIQLLFGLEYWMAVVIVGVLMMVYVIFGGMTATTWVQIIKAVLLLCGATFMAVAALSAFNFSPEEM
FRQAVETHPKAGAIMSPGSLVTDPINAISLGLALMFGTAGLPHILMRFFTVPDAKEARKSVFYATGFIGYFYILTFIIGF
AAIVLLAQNPEFFKPAALAADGSVIQGQLVSGINGGTNMVAIHLAKAVGGDLFLGFISAVAFATILAVVSGLTLAGASAI
SHDLYASVIARGRSNETTEIRVSKFATFGLGLVAIGLGIAFESQNVAFMVGLAFAIAASANFPVLVASIFWSKMTTRGAL
IGGFAGLISAFVLTVMSKAVWGDVLGHVGEDGKSVGLIMLNNPAIVSIPISFACIWLFSIFDNSERAKIDRAAFDAQRIR
CETGIGAEGGASH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01502.1 putative amino acid transport protein Not tested PAGI-1 Protein 2e-128 58
cur_1523 YP_001800917.1 transporter Not tested Not named Protein 1e-70 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thivi_3810 YP_006415777.1 SSS sodium solute transporter BAC0564 Protein 6e-151 65
Thivi_3810 YP_006415777.1 SSS sodium solute transporter BAC0570 Protein 2e-140 61