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Name : Thivi_0368 (Thivi_0368) Accession : YP_006412562.1 Strain : Thiocystis violascens DSM 198 Genome accession: NC_018012 Putative virulence/resistance : Virulence Product : flagellar biosynthetic protein FliP Function : - COG functional category : - COG ID : - EC number : - Position : 379585 - 380322 bp Length : 738 bp Strand : + Note : PFAM: FliP family; TIGRFAM: flagellar biosynthetic protein FliP DNA sequence : ATGCGACTGGGGCTTGTGTTGGCGTTCGCGCTGGTGCCCGGACTTGTCCTGGCCCAGATCGGGGGAATGAATGCGGTCAC CGTCACCAGCGCGCCGGATGGCGGGCAGGTCTATTCGGTGACCCTGCAGATCCTGCTGTTCATGACCCTGCTGACCTTGC TGCCGTCGGCGCTCATCATGCTGACCTCGTTCACGCGCATCATCATCGTGCTGGGCATTCTGCGCCAGGGGTTGGGCACC TCCCAAACGCCCTCGAACCAGATCCTGCTTGGATTGGCGTTGTTTTTGACCCTCTTTGTCATGGCGCCCGTGTTCCAGGA AATTTATGACACGGCCGCCATTCCCTACATGGAGGAGAAACTCGGCACCGAGGAGGCGCTCGGCAAGGCGATCAAACCGC TGCGCACCTTCATGCTGGCGCAAACCCGGGAAACCGATCTGTCGCTCTTCGCCGAGATCCGGGGACTCGACGGTTTCGAC TCGCCCGACGCCATTCCGCTCAATCTGCTGGTGCCGGCCTTTGTGATCAGCGAATTGAAAACCGCCTTCCAGATCGGCTT CCTGATCCTGATTCCCTTTTTGATCATCGACCTGGTGGTGGCCAGCGTCCTCATGTCGATGGGCATGATGATGCTGTCGC CGATGATCATCTCGCTGCCTTTCAAGATCATGCTGTTCGTGCTGGTCGATGGCTGGTCGCTGGTGATGGGCACCTTGGCC CAGAGTTTTTTTACCTGA Protein sequence : MRLGLVLAFALVPGLVLAQIGGMNAVTVTSAPDGGQVYSVTLQILLFMTLLTLLPSALIMLTSFTRIIIVLGILRQGLGT SQTPSNQILLGLALFLTLFVMAPVFQEIYDTAAIPYMEEKLGTEEALGKAIKPLRTFMLAQTRETDLSLFAEIRGLDGFD SPDAIPLNLLVPAFVISELKTAFQIGFLILIPFLIIDLVVASVLMSMGMMMLSPMIISLPFKIMLFVLVDGWSLVMGTLA QSFFT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcR | AAT96262.1 | HrcR | Virulence | S-PAI | Protein | 7e-10 | 44 |
| hrcR | AAT96303.1 | HrcR | Virulence | S-PAI | Protein | 7e-10 | 44 |
| hrcR | AAT96343.1 | HrcR | Virulence | S-PAI | Protein | 7e-10 | 44 |
| hrcR | ABA47279.1 | HrcR | Virulence | S-PAI | Protein | 3e-09 | 43 |
| hrcR | AAT96200.1 | HrcR | Virulence | T-PAI | Protein | 0.34 | 42 |
| hrcR | NP_791222.3 | type III secretion protein HrcR | Virulence | Hrp PAI | Protein | 0.077 | 41 |
| hrcR | ABQ88359.1 | HrcR | Virulence | Hrp PAI | Protein | 1.5 | 41 |
| hrpW | AAB05075.1 | HrpW | Virulence | Hrp PAI | Protein | 1.5 | 41 |
| hrcR | AAG33884.1 | HrcR | Virulence | Hrp PAI | Protein | 0.059 | 41 |
| hrcR | AAT96146.1 | HrcR | Virulence | T-PAI | Protein | 0.32 | 41 |
| yscR | NP_456109.1 | putative type III secretion protein | Virulence | SPI-2 | Protein | 6e-09 | 41 |
| yscR | NP_805090.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 6e-09 | 41 |
| ssaR | YP_216427.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 4e-09 | 41 |
| ssaR | CAA68199.1 | secretion system apparatus, SsaR | Virulence | SPI-2 | Protein | 3e-09 | 41 |
| ssaR | NP_460384.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 4e-09 | 41 |
| YPO0270 | YP_002345352.1 | type III secretion system protein | Virulence | Not named | Protein | 5e-10 | 41 |
| hrcR | AAB06005.2 | HrcR | Virulence | Hrp PAI | Protein | 2e-08 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Thivi_0368 | YP_006412562.1 | flagellar biosynthetic protein FliP | VFG1259 | Protein | 6e-36 | 66 |
| Thivi_0368 | YP_006412562.1 | flagellar biosynthetic protein FliP | VFG2016 | Protein | 3e-34 | 65 |
| Thivi_0368 | YP_006412562.1 | flagellar biosynthetic protein FliP | VFG2338 | Protein | 2e-36 | 62 |
| Thivi_0368 | YP_006412562.1 | flagellar biosynthetic protein FliP | VFG2494 | Protein | 1e-34 | 60 |
| Thivi_0368 | YP_006412562.1 | flagellar biosynthetic protein FliP | VFG0519 | Protein | 2e-09 | 41 |
