|
Name : Thivi_3455 (Thivi_3455) Accession : YP_006415449.1 Strain : Thiocystis violascens DSM 198 Genome accession: NC_018012 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : - COG ID : - EC number : - Position : 3775885 - 3777777 bp Length : 1893 bp Strand : + Note : PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC DNA sequence : ATGAGCGCCATCCCGCAAGAATTCGTCCGCACCACCGCCCGGCTCTCCGAAGAGGTGACCGAACCCTTTCCGAACTCCCG CAAGGTCTATGTGACCGGCTCGCGCCCCGATCTGCGCGTGCCGATGCGCGAGGTGACTTTGACCCCGACTCAGACCAGTC AGGGCGAGGAGGAAAACCCGCCGGTCATGCTCTATGACACCTCCGGTCCCTACACCGATCCGCACGCCCGCATCGATCTC ATGGCCGGTCTCGCCGACCTGCGCTCGGCCTGGATCGAGGAGCGTGGCGACACCGAATTCCTGACCGGCCCGACCTCCGC CTTCGGCCACGCGCGCCAGAGCGATCCGACGTTGGCCCATCTGCGGTTCGAGCATCTGCGCACCCCGCGCCGCGCCAAGG CCGGGCGGAACGTCACCCAGATGCACTACGCCCGCCAGGGCATCGTTACGCCCGAGATGGAATATGTCGCCATCCGCGAG AGCCTGCGGCTCGACGAACTGCGCGCCGATCCACGCTATGCCAAGGTGTTGCGTCAGCATCCCGGCCACGCCTTCGGCGC CAGCCTGCCCGATCTGATCACCCCCGAGTTCGTGCGCGAGGAGATTGCGCGCGGGCGCGCCATCCTCCCGGCCAACATCA ACCATCCGGAAGTCGAGCCGATGATCATCGGGCGCAATTTCCGGGTGAAGATCAACACCAACATCGGCAACTCGGCCCTC AGTTCCTCGATCGAGGAAGAGGTCGAGAAGATGGTCTGGTCGGCGCGTTGGGGCGGCGACACCCTGATGGATCTCTCCAC CGGCAAGAACATCCACGAGACCCGCGAGTGGATCCTGCGCAACGCTCCCATGCCGATCGGCACCGTGCCCATCTATCAGG CGCTCGAAAAGGTCGACGGACGGCCCGAGGAACTGACCTGGGAGCTGATGCGCGACACGCTGATTGAGCAGGCCGAGCAG GGCGTGGACTACTTCACCATCCACGCTGGCGTGCTGCTGCGTTACGTGCCGCTGACCGCCGATCGGCTCACCGGCATCGT CTCGCGCGGCGGCTCCATCCTCGCCAAGTGGTGCCTTGCGCACCATCGGGAAAACTTCCTCTACACCCACTTCGGCGAGA TCTGCGAGATCATGAAGGCGTATGACGTGACCTTCAGCCTCGGCGACGGACTGCGCCCCGGCTCCATCGCCGACGCCAAC GACCGCGCCCAGTTCGCCGAGCTCGAAACCCTGGGCGAGCTGACCAAATTCGCCTGGGAGCAGGATGTCCAGGTCATGAT CGAAGGCCCCGGCCATGTCCCGCTGCAGAAAATCCAGGAGAACATGACTAAGGAACTGGCGGACTGTGATGAAGCGCCCT TCTATACCCTCGGGCCATTGATCACCGACATCGCGCCGGCCTACGATCACATCACCTCCGGCATTGGCGCGGCCAATATC GGCTGGTATGGCACCGCCATGCTCTGTTATGTCACGCCTAAGGAGCATCTGGGTCTGCCCAACAAAGAGGACGTGCGCGA CGGCATCGTCACCTACAAGATCGCCGCCCACGCCGCCGATCTGGCCAAGGGTCTGCCCGGCGCGCAGATCCGCGACAACG CGCTCTCCAAGGCACGCTTCGAGTTCCGTTGGGAGGATCAGTTCAACCTCTCGCTCGATCCCGACCGCGCGCGCGAATAT CACGACCAGACCATGCCCCACGCCGCGCACAAGGTCGCCCATTTCTGCTCCATGTGCGGACCGCATTTCTGTTCGATGAA GATCACCCAGGATGTGCGCGATTATGCGCAGGCGCATCGGATTGAGAACATCGAGGTCGCGGTGGAGGAAGGCATGAAGG AGAAGGCGCGGGAGTTCCTGGAGGAAGGGGCGGCGATCTACAAGGCGGTCTAG Protein sequence : MSAIPQEFVRTTARLSEEVTEPFPNSRKVYVTGSRPDLRVPMREVTLTPTQTSQGEEENPPVMLYDTSGPYTDPHARIDL MAGLADLRSAWIEERGDTEFLTGPTSAFGHARQSDPTLAHLRFEHLRTPRRAKAGRNVTQMHYARQGIVTPEMEYVAIRE SLRLDELRADPRYAKVLRQHPGHAFGASLPDLITPEFVREEIARGRAILPANINHPEVEPMIIGRNFRVKINTNIGNSAL SSSIEEEVEKMVWSARWGGDTLMDLSTGKNIHETREWILRNAPMPIGTVPIYQALEKVDGRPEELTWELMRDTLIEQAEQ GVDYFTIHAGVLLRYVPLTADRLTGIVSRGGSILAKWCLAHHRENFLYTHFGEICEIMKAYDVTFSLGDGLRPGSIADAN DRAQFAELETLGELTKFAWEQDVQVMIEGPGHVPLQKIQENMTKELADCDEAPFYTLGPLITDIAPAYDHITSGIGAANI GWYGTAMLCYVTPKEHLGLPNKEDVRDGIVTYKIAAHAADLAKGLPGAQIRDNALSKARFEFRWEDQFNLSLDPDRAREY HDQTMPHAAHKVAHFCSMCGPHFCSMKITQDVRDYAQAHRIENIEVAVEEGMKEKAREFLEEGAAIYKAV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 74 |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 73 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 73 |
