Gene Information

Name : Thivi_3455 (Thivi_3455)
Accession : YP_006415449.1
Strain : Thiocystis violascens DSM 198
Genome accession: NC_018012
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3775885 - 3777777 bp
Length : 1893 bp
Strand : +
Note : PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC

DNA sequence :
ATGAGCGCCATCCCGCAAGAATTCGTCCGCACCACCGCCCGGCTCTCCGAAGAGGTGACCGAACCCTTTCCGAACTCCCG
CAAGGTCTATGTGACCGGCTCGCGCCCCGATCTGCGCGTGCCGATGCGCGAGGTGACTTTGACCCCGACTCAGACCAGTC
AGGGCGAGGAGGAAAACCCGCCGGTCATGCTCTATGACACCTCCGGTCCCTACACCGATCCGCACGCCCGCATCGATCTC
ATGGCCGGTCTCGCCGACCTGCGCTCGGCCTGGATCGAGGAGCGTGGCGACACCGAATTCCTGACCGGCCCGACCTCCGC
CTTCGGCCACGCGCGCCAGAGCGATCCGACGTTGGCCCATCTGCGGTTCGAGCATCTGCGCACCCCGCGCCGCGCCAAGG
CCGGGCGGAACGTCACCCAGATGCACTACGCCCGCCAGGGCATCGTTACGCCCGAGATGGAATATGTCGCCATCCGCGAG
AGCCTGCGGCTCGACGAACTGCGCGCCGATCCACGCTATGCCAAGGTGTTGCGTCAGCATCCCGGCCACGCCTTCGGCGC
CAGCCTGCCCGATCTGATCACCCCCGAGTTCGTGCGCGAGGAGATTGCGCGCGGGCGCGCCATCCTCCCGGCCAACATCA
ACCATCCGGAAGTCGAGCCGATGATCATCGGGCGCAATTTCCGGGTGAAGATCAACACCAACATCGGCAACTCGGCCCTC
AGTTCCTCGATCGAGGAAGAGGTCGAGAAGATGGTCTGGTCGGCGCGTTGGGGCGGCGACACCCTGATGGATCTCTCCAC
CGGCAAGAACATCCACGAGACCCGCGAGTGGATCCTGCGCAACGCTCCCATGCCGATCGGCACCGTGCCCATCTATCAGG
CGCTCGAAAAGGTCGACGGACGGCCCGAGGAACTGACCTGGGAGCTGATGCGCGACACGCTGATTGAGCAGGCCGAGCAG
GGCGTGGACTACTTCACCATCCACGCTGGCGTGCTGCTGCGTTACGTGCCGCTGACCGCCGATCGGCTCACCGGCATCGT
CTCGCGCGGCGGCTCCATCCTCGCCAAGTGGTGCCTTGCGCACCATCGGGAAAACTTCCTCTACACCCACTTCGGCGAGA
TCTGCGAGATCATGAAGGCGTATGACGTGACCTTCAGCCTCGGCGACGGACTGCGCCCCGGCTCCATCGCCGACGCCAAC
GACCGCGCCCAGTTCGCCGAGCTCGAAACCCTGGGCGAGCTGACCAAATTCGCCTGGGAGCAGGATGTCCAGGTCATGAT
CGAAGGCCCCGGCCATGTCCCGCTGCAGAAAATCCAGGAGAACATGACTAAGGAACTGGCGGACTGTGATGAAGCGCCCT
TCTATACCCTCGGGCCATTGATCACCGACATCGCGCCGGCCTACGATCACATCACCTCCGGCATTGGCGCGGCCAATATC
GGCTGGTATGGCACCGCCATGCTCTGTTATGTCACGCCTAAGGAGCATCTGGGTCTGCCCAACAAAGAGGACGTGCGCGA
CGGCATCGTCACCTACAAGATCGCCGCCCACGCCGCCGATCTGGCCAAGGGTCTGCCCGGCGCGCAGATCCGCGACAACG
CGCTCTCCAAGGCACGCTTCGAGTTCCGTTGGGAGGATCAGTTCAACCTCTCGCTCGATCCCGACCGCGCGCGCGAATAT
CACGACCAGACCATGCCCCACGCCGCGCACAAGGTCGCCCATTTCTGCTCCATGTGCGGACCGCATTTCTGTTCGATGAA
GATCACCCAGGATGTGCGCGATTATGCGCAGGCGCATCGGATTGAGAACATCGAGGTCGCGGTGGAGGAAGGCATGAAGG
AGAAGGCGCGGGAGTTCCTGGAGGAAGGGGCGGCGATCTACAAGGCGGTCTAG

Protein sequence :
MSAIPQEFVRTTARLSEEVTEPFPNSRKVYVTGSRPDLRVPMREVTLTPTQTSQGEEENPPVMLYDTSGPYTDPHARIDL
MAGLADLRSAWIEERGDTEFLTGPTSAFGHARQSDPTLAHLRFEHLRTPRRAKAGRNVTQMHYARQGIVTPEMEYVAIRE
SLRLDELRADPRYAKVLRQHPGHAFGASLPDLITPEFVREEIARGRAILPANINHPEVEPMIIGRNFRVKINTNIGNSAL
SSSIEEEVEKMVWSARWGGDTLMDLSTGKNIHETREWILRNAPMPIGTVPIYQALEKVDGRPEELTWELMRDTLIEQAEQ
GVDYFTIHAGVLLRYVPLTADRLTGIVSRGGSILAKWCLAHHRENFLYTHFGEICEIMKAYDVTFSLGDGLRPGSIADAN
DRAQFAELETLGELTKFAWEQDVQVMIEGPGHVPLQKIQENMTKELADCDEAPFYTLGPLITDIAPAYDHITSGIGAANI
GWYGTAMLCYVTPKEHLGLPNKEDVRDGIVTYKIAAHAADLAKGLPGAQIRDNALSKARFEFRWEDQFNLSLDPDRAREY
HDQTMPHAAHKVAHFCSMCGPHFCSMKITQDVRDYAQAHRIENIEVAVEEGMKEKAREFLEEGAAIYKAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 74
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 73
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 73