Gene Information

Name : Thivi_3132 (Thivi_3132)
Accession : YP_006415134.1
Strain : Thiocystis violascens DSM 198
Genome accession: NC_018012
Putative virulence/resistance : Resistance
Product : putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3425572 - 3426255 bp
Length : 684 bp
Strand : +
Note : PFAM: ABC transporter; manually curated

DNA sequence : 
GTGCAATCGGCTCAAGCCGTCTCCAGTGCGATGGGATTGGGCAAGCATGTTAACGGTCCGGTCGGTGGCTTGACCATCCT
CGCGGGACTGGATCTGGAGATCGGGGCCGGCGAGGCGGTCGCCATTCTGGGCGCCTCTGGGTCGGGCAAATCGACCCTGC
TGGGCTTGCTGGCGGGTCTGGACGACGCCACCGCGGGCGAGGTCTGGCTGTGCGGCCAGCGTATTGAAGACTTAGACGAA
GATGGACGCGCCGCGTTGCGCAGCGGCCGCGTCGGTTTCGTCTTTCAGAACTTCCAGCTTCTGCCGACGCTGACCGCGCG
CGAGAACATCCTGCTGCCGCTGGAGTTGACAGGCGATGCACGGGCCGCGCAACGGGCCGACGAGGCGCTGGAGCGGGTCG
GCCTCACCGCGCGCGCCGGGCACTATCCGCGCCAACTCTCCGGCGGCGAGCAACAGCGCGTCGCCATCGCCCGCGCCTAC
GCGCCACGTCCCGCCGTGCTCTTTGCCGACGAGCCCACGGGGAACCTGGATCAGGTTACCGGCGAGCACATCATCGACCT
GCTGCTCGACCTGCGCCGGGCGGCCGGCGCGGCACTGGTGCTGGTCACCCATGATCTGCGACTCGCCGAACGTTGCGACC
GCCGGTTGCGCATGGACAACGGACATCTGGAGCCGCTGTCATGA

Protein sequence : 
MQSAQAVSSAMGLGKHVNGPVGGLTILAGLDLEIGAGEAVAILGASGSGKSTLLGLLAGLDDATAGEVWLCGQRIEDLDE
DGRAALRSGRVGFVFQNFQLLPTLTARENILLPLELTGDARAAQRADEALERVGLTARAGHYPRQLSGGEQQRVAIARAY
APRPAVLFADEPTGNLDQVTGEHIIDLLLDLRRAAGAALVLVTHDLRLAERCDRRLRMDNGHLEPLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-20 48
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-20 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-20 46
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 9e-20 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thivi_3132 YP_006415134.1 putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component NC_008702.1.4606598. Protein 1e-23 53
Thivi_3132 YP_006415134.1 putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component NC_012469.1.7686878. Protein 2e-22 49