|
Name : Thivi_2797 (Thivi_2797) Accession : YP_006414840.1 Strain : Thiocystis violascens DSM 198 Genome accession: NC_018012 Putative virulence/resistance : Virulence Product : L-glutamine synthetase Function : - COG functional category : - COG ID : - EC number : 6.3.1.2 Position : 3065768 - 3067171 bp Length : 1404 bp Strand : - Note : PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I DNA sequence : ATGACAGACGTCATCAAGATGATCAAAGACAACGAAGTGAAGTTCGTCGATCTTCGCTTCACGGATACCCGCGGGAAGGA GCAGCACGTCTCCATGCCAGCCAGTGTGATCGACGAAGACATGTTCAGGGACGGCAAGATGTTCGATGGCTCGTCGATCG CCGGGTGGAAAGGCATCGAGGCATCCGACATGGTTCTGATGCCGGAGCCCGATACCGCCGTGATGGACCCCTTCACCGAC GAAAATACCCTGATCATTCGCTGCGATATTCTCGAACCCGAGACCATGACCGGCTATGAGCGCGATCCTCGCTCCGTCGC AAAGCGCGCCGAGGCTTACCTGAAGTCAACCGGCGTGGCGGATACCGCCTACTTTGGCCCGGAGCCCGAGTTCTTCATCC TGGACGACGTCCGCTGGGGCGCCGACATGAGCGGTTGCTTCTACAAGATCGACTCGGAAGAGGCCGGCTGGAACTCCGAG CGCGTCTTCCCGGATGGCAACATGGGTCATCGTCCCGGCACCAAGGGCGGCTATTTCCCTGTTCCGCCGGTCGATTCGCT GAACGATCTGCGCGCGGCCATGTGCTTGACGCTCGAGGAAATGGGCGTTCCGGTCGAGGTCCATCATCACGAGGTCGCCA CTGCGGGACAGTGCGAGATCGGCACCCGCTTCGATACGTTGGTCCGCCGCGCCGACAAGAACCAGATCACCAAGTACGTG ATCCAGAATGTCGCGCATGCCTATGGCAAGACGGCCACCTTCATGCCTAAGCCGATCGTCGGCGACAATGGCACCGGCAT GCACGTTCATCAATCGTTGAGCAAGGACGGCCAGAACCTCTTTGCCGGCGACAAATACGGCGGTCTGTCCGACACGGCGC TGTATTACATCGGTGGCATCATCAAGCACGCTCGCGCGCTGAATGCCCTGACCAATGCCTCGACCAATTCCTATAAGCGA CTGGTCCCTGGATTCGAGGCCCCGGTCATGCTGGCCTACTCGGCGCGCAACCGCTCCGCCTCCATTCGCATCCCGTTCAG CGCCAGCCCCAAGGGCCGCCGCATCGAGGTGCGTTTCCCGGACTCCACCGGCAACCCCTACCTGGCATTCTCGGCCATGA TGCTGGCCGGTCTGGATGGTATCCAGAACAAGATCCATCCCGGCGATGCCATGGACAAGGATCTCTACGACCTGCCGCCC GAGGAGGCGAAGTCGATTCCGACCGTCTGCTATTCGCTGGATATGGCGCTGGACGCGCTGGATCAGGATCGCGACTTCCT GACCGCCGGGGGCGTCTTCAGCGACGATTTGATCGACAGTTACATCACCTTGAAAATGGCTGAAGTCACCCGGTTGCGCA TGACCACGCATCCGGTTGAATTCGACATGTATTACAGCCTGTAA Protein sequence : MTDVIKMIKDNEVKFVDLRFTDTRGKEQHVSMPASVIDEDMFRDGKMFDGSSIAGWKGIEASDMVLMPEPDTAVMDPFTD ENTLIIRCDILEPETMTGYERDPRSVAKRAEAYLKSTGVADTAYFGPEPEFFILDDVRWGADMSGCFYKIDSEEAGWNSE RVFPDGNMGHRPGTKGGYFPVPPVDSLNDLRAAMCLTLEEMGVPVEVHHHEVATAGQCEIGTRFDTLVRRADKNQITKYV IQNVAHAYGKTATFMPKPIVGDNGTGMHVHQSLSKDGQNLFAGDKYGGLSDTALYYIGGIIKHARALNALTNASTNSYKR LVPGFEAPVMLAYSARNRSASIRIPFSASPKGRRIEVRFPDSTGNPYLAFSAMMLAGLDGIQNKIHPGDAMDKDLYDLPP EEAKSIPTVCYSLDMALDALDQDRDFLTAGGVFSDDLIDSYITLKMAEVTRLRMTTHPVEFDMYYSL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glnA | YP_003728749.1 | glutamine synthetase | Not tested | cag PAI | Protein | 9e-107 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Thivi_2797 | YP_006414840.1 | L-glutamine synthetase | VFG1399 | Protein | 7e-110 | 52 |
