Gene Information

Name : Thivi_2470 (Thivi_2470)
Accession : YP_006414535.1
Strain : Thiocystis violascens DSM 198
Genome accession: NC_018012
Putative virulence/resistance : Unknown
Product : single stranded DNA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2712313 - 2712825 bp
Length : 513 bp
Strand : -
Note : PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb)

DNA sequence :
ATGGCAGGCGTGAATAAGGTGATTCTGATCGGGAATCTCGGGGCCGATCCCGAGGTGCGTTACATGCCGAGCGGCGATGC
GGTGGCCAATATCCGCATCGCGACCAGCGAGTCCTGGAAGGATCGCAATACCGGCGAAAAACAGGAGCGGACCGAATGGC
ACAACGTGGTCTTCTTCGGCAAGATCGCGGAGATCGTCAAGCAGTACCTGCACAAGGGCTCGAAGGTCTATGTCGAGGGC
AAGCTGCGCACCCGTAAATGGCAGGGACAGGACGGGCAGGACCGCTATACGACCGAGGTCGTCGTCGACATCAATGGAAC
CATGCAGATGCTGGACAGCCGTCAAGGGGGTGGCTCGTCGGTCCCCTTCGACGACGATCCTTCGTATCAATCCCTTGGCG
GTAGCAGCCGCTCTCGGGCTGCCTCGCCAGCACCTGCACCGTCGAGCGGTTCTGCATCCGGAAGCCAGGGCGGCGCATCC
TCCGTGCCTTTCGACGACGACATTCCTTTTTAA

Protein sequence :
MAGVNKVILIGNLGADPEVRYMPSGDAVANIRIATSESWKDRNTGEKQERTEWHNVVFFGKIAEIVKQYLHKGSKVYVEG
KLRTRKWQGQDGQDRYTTEVVVDINGTMQMLDSRQGGGSSVPFDDDPSYQSLGGSSRSRAASPAPAPSSGSASGSQGGAS
SVPFDDDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb1 YP_005176252.1 single-stranded DNA-binding protein Not tested ICEPmu1 Protein 2e-35 60