Gene Information

Name : Thivi_2343 (Thivi_2343)
Accession : YP_006414414.1
Strain : Thiocystis violascens DSM 198
Genome accession: NC_018012
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.1.40
Position : 2562891 - 2564333 bp
Length : 1443 bp
Strand : -
Note : PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase

DNA sequence :
ATGCCAAGACGTACCAAGATTGTCGCTACACTGGGGCCGGCAACCGACGATCCGTCGGTCATGGATGACATCATCGCCGC
GGGCGTCGATGTAGTCCGTCTCAACCTGTCGCACGACAGCCACGCGCGGCACCGCGAACGCGCCGAACGCATCCGCGAGC
GCGCGCTGGCGGCCGGTCATGCGATCGCGGTGCTGATGGACCTGCAGGGTCCGAAGATCCGCATCGGTAAATTTACCGAG
GGCAAGGTCCAGCTCGCGCGGGGCGATGCCTTCGCGATCGATACCGCCTGCGGCATCGAGTCGGGCGATATCACGCGGGT
CGGCACCACCTATGTCGAACTGGCCGATGACGTGCGCCACGGCGATACCCTGCTGCTCGACGATGGGGCCATCGAACTCT
GGGTCGAGTCGGTCGCCAATGGACGCATCGATTGCAAGGTGGTCGTGGGCGGGTCGCTCTCCAACAACAAGGGCATCAAC
AAGAAGGGCGGCGGGCTCTCCGCGCCGGCCCTGACCGACAAGGACAAGGAAGACATCCGGTTCGCCGCCGAGATCGACGC
CGATTATCTGGCGGTCTCCTTCGTGCGCAACGGCGACGACGTGCGGCTCGCCCGCGCACTGTTCCAGGAGGCCGGGGGGC
GCGGCGGAATCGTCGCCAAGATCGAGCGCGCCGAGTCGTTGAACGGAATCGACGATATCATCCACGCCTCCGACGCCATC
ATGGTGGCGCGTGGCGATCTCGGCGTGGAGATTGGCGACGCGGAACTGCCGGCGGTTCAGAAGCGTCTGATCAGCCGTGC
GCGCGATCTCAACAGCGTGGTCATCACGGCAACCCAGATGATGCAGTCGATGATCGAGAACCCGATCCCGACGCGGGCCG
AGGTCTTCGATGTGGCCAATGCCGTGCTGGACGGCACCGACGCGGTGATGCTGTCGGCGGAAAGCTCAATCGGCAAGTAT
CCCGCCAAGGTGGTCGAGGCGCTTGATCGCATCTGTCTGGAGGCCGAGAAGAGCGTGACCCGCTCGGGACACCGCATCGA
TTCGGTCTTCGGTCGGGTGGACGAGGGCATCGCCATGGCCGCGATGTACACCGCCAACCATCTGGGCGTGAAGGCGATCG
CGGCGCTGACCGAGACCGGCTCGACGGTGAAATGGATGTCGCGTATCAGCTCCGGCATCCCCATCTACGCCATGACCCGA
TTCGCGCCGACCCGGCGGAAGGTGAGACTCTTTCGCGGCGTCTATCCGGTCAGCTTCGATGTCGCCACGACCGACATCCA
CGAGGTCAACTGCGAGGTGATCGAGGAACTGCTGCGCCGGGGCACGGTGCGCGACGGCGATCTGGTCATCATCACCAAGG
GTGACCGCTCCGGGGTTGAAGGTCAGACGAATATCATGAAAATCATGCGAGTCGGAGAGCATCGGCTGCTGAACGAAGAC
TGA

Protein sequence :
MPRRTKIVATLGPATDDPSVMDDIIAAGVDVVRLNLSHDSHARHRERAERIRERALAAGHAIAVLMDLQGPKIRIGKFTE
GKVQLARGDAFAIDTACGIESGDITRVGTTYVELADDVRHGDTLLLDDGAIELWVESVANGRIDCKVVVGGSLSNNKGIN
KKGGGLSAPALTDKDKEDIRFAAEIDADYLAVSFVRNGDDVRLARALFQEAGGRGGIVAKIERAESLNGIDDIIHASDAI
MVARGDLGVEIGDAELPAVQKRLISRARDLNSVVITATQMMQSMIENPIPTRAEVFDVANAVLDGTDAVMLSAESSIGKY
PAKVVEALDRICLEAEKSVTRSGHRIDSVFGRVDEGIAMAAMYTANHLGVKAIAALTETGSTVKWMSRISSGIPIYAMTR
FAPTRRKVRLFRGVYPVSFDVATTDIHEVNCEVIEELLRRGTVRDGDLVIITKGDRSGVEGQTNIMKIMRVGEHRLLNED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykA NP_273151.1 pyruvate kinase Not tested IHT-A Protein 7e-71 46
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 1e-51 41
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 7e-52 41
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 4e-52 41
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 4e-52 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thivi_2343 YP_006414414.1 pyruvate kinase VFG0479 Protein 2e-52 41