Gene Information

Name : Thivi_2290 (Thivi_2290)
Accession : YP_006414362.1
Strain : Thiocystis violascens DSM 198
Genome accession: NC_018012
Putative virulence/resistance : Virulence
Product : type VI secretion protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2500899 - 2501429 bp
Length : 531 bp
Strand : -
Note : PFAM: Protein of unknown function (DUF770); TIGRFAM: type VI secretion protein, VC_A0107 family

DNA sequence : 
GTGGCCCAAAGCAGCCAGAAATTCATCGCCAGAAATCGTGCCCCAAGGGTTCAGATCGAATATGACGTGGAACTCTACGG
GGCCGAAAAAAAGGTCCAGCTTCCCTTCGTGATGGGTGTTCTGGCCGACCTGTCCGGCAAACCGGCGGAACCGCTCCCAG
CGGTTGGCGACCGCAAATTCCTGGAGATCGATGTCGATAACTTCGATGATCGACTCAAGGCGATGAAACCGCGCGCGGCG
TTTCAGGTGCCCAATACCCTGACGGGCGAGGGTAACCTCAGCGTCGATATCACCTTCGAGAGCATGGACGATTTTTCTCC
CGCCGCGGTTGCACGCAAGGTCGGCGCGCTGAGCAAACTGCTGGAGGCGCGTGAGCAACTCTCCAATCTGTTGAGCTACA
TGGATGGCAAGACGGGCGCCGAGGAGTTGATCGCCAAGGCGCTCGCCGATCCCGCGCTGCTCCAGGCATTGGCCTCGGCC
CCCAAGCCGTCGGGCGAGGCGGCCGACGCATCGACGACGACGGAGGGCTAA

Protein sequence : 
MAQSSQKFIARNRAPRVQIEYDVELYGAEKKVQLPFVMGVLADLSGKPAEPLPAVGDRKFLEIDVDNFDDRLKAMKPRAA
FQVPNTLTGEGNLSVDITFESMDDFSPAAVARKVGALSKLLEAREQLSNLLSYMDGKTGAEELIAKALADPALLQALASA
PKPSGEAADASTTTEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0297 NP_454879.1 conserved hypothetical protein Not tested SPI-6 Protein 7e-53 73

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thivi_2290 YP_006414362.1 type VI secretion protein VFG2069 Protein 4e-58 87