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Name : Thivi_2178 (Thivi_2178) Accession : YP_006414253.1 Strain : Thiocystis violascens DSM 198 Genome accession: NC_018012 Putative virulence/resistance : Virulence Product : nucleotide sugar dehydrogenase Function : - COG functional category : - COG ID : - EC number : - Position : 2378367 - 2379653 bp Length : 1287 bp Strand : - Note : PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase DNA sequence : ATGAAACCTATCGTTGCCGTCGTTGGCCTGGGCTATGTCGGTCTGCCGCTCGCGGTCGAATTCGGTAAGCAATACGAAAC CATTGGCTACGATCTCTCGGAGGCCAAAATCGCGCAGTACCGCAACCACTGCGATCCCACCGGCGAGGTCAGTACCGAAG ACCTGAAGGCGGCGACCCGGCTCAGCGTCAGCACCGACCCATCCACGCTTGGCAAGGCCGATTTCATTGTCGTCGCCGTG CCGACTCCGGTGGACGACACCCATATCCCCGATTTCTCGCCGCTAGTCGGTTCTTCCACCACCGTCGGTCAACACATGAA GCGAGGCGCGACGGTGGTCTATGAATCCACCGTCTATCCGGGCGCCACCGAGGAGGTCTGCGTTCCGCTGCTGGAAGAGC ACTCCGGTTTGAAATGGAAAACGGATTTCCATGTCGGCTACTCTCCCGAGCGGGTCAACCCCGGCGACAAGGAGCGCACC ATCACCCGCATCGTGAAAGTTGTTGCCGGCGATGACGAGCCGACCGCCGATGCCGTGGCCGCACTCTATGCCTCGGTGAT TACCGCCGGGGTTCACCGCGCCAGTTCGATCAAGGTTGCCGAGGCCGCCAAGGTCATCGAAAACACGCAACGCGATCTCA ACATCGCGCTGATGAACGAGCTGGCGCTGATCTTCGGGCGGCTTGGTATCGATACCCTGGAAGTGCTGCAAGCCGCCGGC ACCAAATGGAATTTCCTCCCCTTCCGGCCTGGCCTGGTTGGCGGCCACTGTATCGGCGTCGATCCCTACTATCTCACCCA CAAGGCGGTGGCGCTGGGCTATCACCCCGAGGTCATCCTGGCCGGTCGGCGCATCAACGACGGCATGGCCGCGTATGTGG CGCAACAAACCGTCAAGGCGCTGATCAACAATGGCGACACCATCAAGGGCGACAAGGTCATCGTGCTGGGCCTCACCTTC AAGGAAAACTGCCCCGATCTGCGCAACTCCAAGGTCGCCGACCTCGTCCGGGAACTGCAATCCTTCGGTTGCGAGGTTGC CGTGCACGATCCCATCGCCGAATCCTCGGAGGCCGAACATGAATACGGCATCCGTCTCACGCCCTGGGAGCAGTTACCCA AAGACGCATCGGCCATCGTCGCCGCCGTGTCGCACCGGGAGTATCTGGCCATGTCGCTGGCTGAACTAACCTCTAGGCTG AAGCAGGGCGGCGTCTTTACCGATGTGAAGTCGGCTTATGATCCGGACGCGATTCGGGCTGCGGGTTTCAGGCTTTGGCG GTTGTGA Protein sequence : MKPIVAVVGLGYVGLPLAVEFGKQYETIGYDLSEAKIAQYRNHCDPTGEVSTEDLKAATRLSVSTDPSTLGKADFIVVAV PTPVDDTHIPDFSPLVGSSTTVGQHMKRGATVVYESTVYPGATEEVCVPLLEEHSGLKWKTDFHVGYSPERVNPGDKERT ITRIVKVVAGDDEPTADAVAALYASVITAGVHRASSIKVAEAAKVIENTQRDLNIALMNELALIFGRLGIDTLEVLQAAG TKWNFLPFRPGLVGGHCIGVDPYYLTHKAVALGYHPEVILAGRRINDGMAAYVAQQTVKALINNGDTIKGDKVIVLGLTF KENCPDLRNSKVADLVRELQSFGCEVAVHDPIAESSEAEHEYGIRLTPWEQLPKDASAIVAAVSHREYLAMSLAELTSRL KQGGVFTDVKSAYDPDAIRAAGFRLWRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 7e-110 | 55 |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 8e-102 | 51 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 8e-102 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Thivi_2178 | YP_006414253.1 | nucleotide sugar dehydrogenase | VFG0431 | Protein | 3e-102 | 51 |
