|
Name : Thivi_2083 (Thivi_2083) Accession : YP_006414161.1 Strain : Thiocystis violascens DSM 198 Genome accession: NC_018012 Putative virulence/resistance : Virulence Product : urease subunit alpha Function : - COG functional category : - COG ID : - EC number : - Position : 2264191 - 2265894 bp Length : 1704 bp Strand : - Note : PFAM: Urease alpha-subunit, N-terminal domain; Amidohydrolase family; TIGRFAM: urease, alpha subunit DNA sequence : ATGAGCCGCATCGATCGCGCCGCCTATGCGGCACTCTATGGCCCCACGGTCGGTGACCGGATCCGTCTGGGCGACTCCGA GCTGCTGATCCAGATCGAGGCCGATCAGACCGTCCACGGCGACGAGGTCTCCTTCGGCGGCGGCAAGGTCATCCGCGACG GCATGGGCCAGAGCCAGCGTCCGGCCGCCGAGGTCGCGGATCTGGTCATCACCAATGCGGTGATCCTGGATCACTGGGGG ATCGTCAAGGCCGATGTCGGGATCAAGGACGGGCGCATCGCCGGCATCGGCAAGGCCGGCAATCCGGACACCCAGGCGGG CGTCGACATCCTCATCGGTCCCGGCACCGAGATCGTCGCCGGGGAGGGCCAGATTCTCACCGCCGGCGGGATCGACGCGC ATATCCATTTCATCTGCCCGCAGCAGATCGAGGACGCCCTGATGTCGGGCGTGACCACACTGCTCGGCGGCGGCACCGGC CCGGCGACCGGCACCAATGCGACCACCTGCACCCCTGGCCCCTGGAACATCCATCGCATGTTGCAGGCCGCCGAGGGACT GCCGGTCAACCTCGGCTTCCTGGGCAAGGGCAACGCCAGCCAGCCGCGCCCGCTGGAGGAACAGGTCGAGGCCGGCGCCA TGGGGCTCAAGCTCCACGAGGACTGGGGCACCACGCCCGCCGCCATCGATTGCTGTCTCGGCGTGGCCGAGCGTCACGAC GTGCAGGTCGCCATCCACACCGACACACTCAACGAGTCGGGTTTCGTCGAGGACACCCTTGCCGCCTTCAAGGATCGCAC CATCCACACCTATCACACCGAAGGCGCGGGCGGCGGTCACGCCCCGGACATCATCAAGGCCGCCGGTCTGCCCAACGTGC TGCCGTCCTCGACCAACCCGACCCGACCCTACACGGTCAACACGGTCGACGAACATCTGGACATGCTGATGGTCTGCCAT CACCTATCCCCGTCGATTCCGGAAGATGTGGCCTTCGCCGAATCGCGCATCCGCCGCGAGACCATCGCCGCCGAGGACAT CCTGCACGACCTGGGTGCCTTCAGCATGATCGCCTCCGACAGCCAGGCCATGGGTCGGGTCGGCGAAGTCATCACCCGTA CCTGGCAGACCGCGCACAAGATGAAGGTCCAGCGTGGCGCCCTGGCCGGCGATCCGGCCACCCACGACAACGCGCGCGCC AAGCGCTATGTCGCCAAGTACGGCATCAATCCAGCGATTGCCCACGGCATCGCCCACGAGGTCGGTTCGGTCGAGGTCGG CAAACTCGCCGATCTGGTGCTCTGGCGCCCGGCCTTCTTCGCCACCAAGCCGAGCCTGATCATCAAGGGCGGGATGATCG TCGCCGCGCCAATGGGCGACCCGAACGCCTCCATTCCGACCCCGCAACCGGTCCACTACCGCCCCATGTTCGGCGCGCTC GGCGGGGCGCTCGCCGCCACCTGCATGACCTTCCTTTCGGGGGCCGCCATCGCCGCGGAGATTCCGGGGCAACTCGGACT CCGGCGTCTCGTTGGCCAGGTGCGCGACACTCGCTCGGTGCGCAAGTCCGACATGATCCACAACCACTGGCAGCCGTGCA TCGAGGTCGATCCTCAGACCTACGAGGTCCGCGCCGACGGCGAACTCCTGACCTGCGAACCGGCGGCCGTGCTACCGTTC GCGCAACGGTACTTCCTGTTCTGA Protein sequence : MSRIDRAAYAALYGPTVGDRIRLGDSELLIQIEADQTVHGDEVSFGGGKVIRDGMGQSQRPAAEVADLVITNAVILDHWG IVKADVGIKDGRIAGIGKAGNPDTQAGVDILIGPGTEIVAGEGQILTAGGIDAHIHFICPQQIEDALMSGVTTLLGGGTG PATGTNATTCTPGPWNIHRMLQAAEGLPVNLGFLGKGNASQPRPLEEQVEAGAMGLKLHEDWGTTPAAIDCCLGVAERHD VQVAIHTDTLNESGFVEDTLAAFKDRTIHTYHTEGAGGGHAPDIIKAAGLPNVLPSSTNPTRPYTVNTVDEHLDMLMVCH HLSPSIPEDVAFAESRIRRETIAAEDILHDLGAFSMIASDSQAMGRVGEVITRTWQTAHKMKVQRGALAGDPATHDNARA KRYVAKYGINPAIAHGIAHEVGSVEVGKLADLVLWRPAFFATKPSLIIKGGMIVAAPMGDPNASIPTPQPVHYRPMFGAL GGALAATCMTFLSGAAIAAEIPGQLGLRRLVGQVRDTRSVRKSDMIHNHWQPCIEVDPQTYEVRADGELLTCEPAAVLPF AQRYFLF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ureC | NP_286680.1 | urease subunit alpha | Virulence | TAI | Protein | 0.0 | 70 |
| ureC | NP_287088.1 | urease subunit alpha | Not tested | TAI | Protein | 0.0 | 70 |
| ureC | YP_005684266.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 3e-164 | 62 |
| ureC | YP_003784325.1 | urease subunit alpha | Not tested | PiCp 7 | Protein | 3e-164 | 62 |
| ureC | YP_005686358.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 3e-164 | 62 |
| ureC | YP_005682174.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 3e-164 | 62 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Thivi_2083 | YP_006414161.1 | urease subunit alpha | VFG0270 | Protein | 3e-149 | 62 |
