Gene Information

Name : Thivi_0196 (Thivi_0196)
Accession : YP_006412392.1
Strain : Thiocystis violascens DSM 198
Genome accession: NC_018012
Putative virulence/resistance : Unknown
Product : site-specific recombinase, DNA invertase Pin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 203446 - 204048 bp
Length : 603 bp
Strand : -
Note : PFAM: Resolvase, N terminal domain

DNA sequence :
ATGGACATCGGCTATGCCCGTGTCAGCACCAAAGACCAGAGCCTGGACCTGCAGGTCGACGCCTTGCGCCGCGCCGGGTG
CGCGAAGGTCTACCAGGAGGTCGTCAGCGGCGCCAAGGTCCCGCGTCCGGTCCTCGATACCCTGCTGGGCGAGCTGCGCC
CGGGCGACGTGCTGGTGATCTGGAAACTCGACCGTCTCGGGCGTTCCCTGCGTCACTTGGTCGAACTGGCTGGCGTACTG
CTGGAACAGCAGGTCGGGCTCAAGAGCCTCAACGATCCACTGGACACCACCACCTCCCAGGGTCGGTTGGTGTTCAATTT
GTTCGCCGCGCTGGCTGAATTTGAAAAGGATCTGATCCGCGAACGCACCCAGGCCGGGTTGGTCGCTGCGCGTGCTCGCG
GTCGCCTGGGCGGGCGCCCCAAGGGCCTACCGCCCGAGGCTGAGAAAACCGCCTGCGCCGCCGAGACCCTCTACCGCGAG
CGGCGCCTATCGGTGCGCGAGATCGCCGCCCAGCTTGGCATCGCCAAAAGTACCCTCTACGACTACCTGCGCCACCGCGG
GGTGCCGATCGGCACCCCGGGCCCGGCCGCGCAGGGCCGTTAG

Protein sequence :
MDIGYARVSTKDQSLDLQVDALRRAGCAKVYQEVVSGAKVPRPVLDTLLGELRPGDVLVIWKLDRLGRSLRHLVELAGVL
LEQQVGLKSLNDPLDTTTSQGRLVFNLFAALAEFEKDLIRERTQAGLVAARARGRLGGRPKGLPPEAEKTACAAETLYRE
RRLSVREIAAQLGIAKSTLYDYLRHRGVPIGTPGPAAQGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ABTW07_3871 YP_005797119.1 resolvase IS26 Not tested AbaR4e Protein 5e-29 53
tnpR ACN81015.1 TnpR resolvase Not tested AbaR5 Protein 5e-29 53
1_318 CAJ77076.1 Resolvase Not tested AbaR1 Protein 3e-29 53
res AGF34985.1 resolvase Not tested SGI1 Protein 5e-31 49
res AGF35025.1 resolvase Not tested SGI1 Protein 5e-31 49
res AGF35059.1 resolvase Not tested SGI1 Protein 5e-31 49
res AGK06929.1 resolvase Not tested SGI1 Protein 5e-31 49
res AGK06966.1 resolvase Not tested SGI1 Protein 5e-31 49
res AGK07012.1 resolvase Not tested SGI1 Protein 5e-31 49
res AGK07070.1 resolvase Not tested SGI1 Protein 5e-31 49
res AAK02044.1 resolvase Not tested SGI1 Protein 5e-31 49
tnpR ACD85600.1 TnpR resolvase Not tested SGI2 Protein 5e-31 49
CDBH8_0918 YP_005160010.1 transposase-like protein Not tested Not named Protein 2e-27 47
binR YP_254224.1 resolvase/integrase BinR Not tested ¥ðSh1 Protein 1e-27 46
SH1761 YP_253676.1 DNA-invertase Not tested ¥ÕSh1 Protein 2e-27 46
binL YP_254524.1 DNA-invertase Not tested ¥ðSh2 Protein 2e-27 46