Gene Information

Name : Thivi_1841 (Thivi_1841)
Accession : YP_006413937.1
Strain : Thiocystis violascens DSM 198
Genome accession: NC_018012
Putative virulence/resistance : Virulence
Product : peroxiredoxin
Function : -
COG functional category : -
COG ID : -
EC number : 1.11.1.5
Position : 2004747 - 2005244 bp
Length : 498 bp
Strand : +
Note : PFAM: Redoxin

DNA sequence : 
ATGGCTCAAACCGCACTCCAAGGCAACCCCGTCAACCTCAGCGGCGACCTGCCCGCCATCGGCAGCACGGCGCCCGACTT
CAAGCTGGTCGACAAGGATCTGGCCGACAAAACGCTGGCCGATTTCGCCGGCAAGAAGAAGCTGCTGAACATCGTGCCCA
GTCTGGATACCCCGGTCTGCGCGACCTCGACCAAGAAATTCAACGCCGCCATCGCCGGGAAGGCCGATGCCGTCGCGCTG
GTGATCTCCGCCGACCTGCCCTTCGCGATGGGCCGTTTCTGCGGCGCCGAGGGAATCGAGAACGTCATCGGTCTGTCGAT
GATGCGCTCACGCAACTTCGCCAAGGACTATGGCGTGCTGATCGAAGACGGCCCGCTGGCCGGTATCACCGCCCGCGCGG
TCGTCGTCCTGGATGCGGACAATCAGGTGGTCTACACCCAACTGGTGCCCGAGATCACCGATGAGCCGGATTACGAGGCG
GCCCTGGCCGCACTGTAG

Protein sequence : 
MAQTALQGNPVNLSGDLPAIGSTAPDFKLVDKDLADKTLADFAGKKKLLNIVPSLDTPVCATSTKKFNAAIAGKADAVAL
VISADLPFAMGRFCGAEGIENVIGLSMMRSRNFAKDYGVLIEDGPLAGITARAVVVLDADNQVVYTQLVPEITDEPDYEA
ALAAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 4e-32 45
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 4e-32 45
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 3e-32 45
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 3e-32 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thivi_1841 YP_006413937.1 peroxiredoxin VFG0087 Protein 1e-32 45