|
Name : Thivi_1735 (Thivi_1735) Accession : YP_006413834.1 Strain : Thiocystis violascens DSM 198 Genome accession: NC_018012 Putative virulence/resistance : Unknown Product : ATP-dependent carboxylate-amine ligase Function : - COG functional category : - COG ID : - EC number : - Position : 1887563 - 1888942 bp Length : 1380 bp Strand : - Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent protease HslVU, ATPase subunit DNA sequence : ATGAAGCGATCCGACGCCCCGGTTCGCTTCGCGCAATGGATGGAAGACATGTCTGAAATCACCCCACAGCGTATCGTCGC GGAACTCGACAAACACATCGTCGGTCAGGACGACGCCAAGCGCGCCGTGGCGATCGCGCTGCGCAACCGCTGGCGCCGCT CGCAGATCGCCGAGCCCATGCGTTCGGAGATCACGCCCAAGAATATCCTGATGATCGGTCCCACGGGTGTCGGCAAGACC GAGATCGCCCGACGGCTCGCTAAGCTGGCGAATGCCCCTTTCATCAAGGTGGAGGCGACCAAGTTCACCGAGGTGGGGTA TGTTGGGCGCGACGTGGAATCCATCATCCGCGATCTGGCCGATATCGGCGTGAAGATGGCCCGCGAGCAGGAAATGGCCA AGCTGGCCGATCAGGCCGAGGCCGCCGCCGAGGAACGCATCCTCGACGCGCTGCTGCCCCCGCCGTCCGGTTTCGAGGAA GAGACCCGTTCCGCCGCCAGCTCCAAGACCCGCGAGAAATTCCGCGACAAACTGCGCGCTGGCGAACTCGACGATCGGGA GATCGAAATCCAGCTTTCGGCCACCCCCCTTGGGGTCGAGATCATGGCCCCGCCCGGCATGGAGGAGATGTCCAGCCAAC TCCAGGGGCTGTTCCAGAATCTGGGCCAGGGCCGGATGAAGCGGCGCAAGCTGCGCATCCGCGATGCCCTTCAGATCCTC AAGGACGAAGAGGCCGCCAAGCGGGTCAATGACGAGGATCTGAAACTGCGCGCGATCGAGAACGTGGAGCAGAACGGCAT CGTCTTTCTGGACGAACTGGATAAGGTCACCAAACGCGGCGAGGCCATGGGCGGCGCCGATGTCTCGCGCGAGGGGGTGC AGCGCGATCTGCTGCCGATCGTCGAGGGCAGCACGGTCTCGACCAAACATGGCGCGGTGCGCACCGATCACATCCTCTTC ATCGCCTCCGGCGCTTTTCATCTGTCCAAGCCTTCGGACTTGATCCCGGAATTGCAGGGCCGTCTGCCGATCCGGGTCGA ACTCAAGGCGCTGACGACCGAAGATTTCGTGCGCATCCTGACCGAGCCGGATGCCTCGCTGACCGACCAATATCGCGCGC TGTTGGGAACGGAAGGCGTGCATCTGGATTTCACCGAGGACGGTATCCGGCGACTGGCCGAGATCGCCTGGCAGGTCAAC GAGCGGACCGAGAACATCGGTGCGCGGCGTCTGCATACGGTGATGGAGCGGTTATTGGAGGATGTGTCCTATAACGCCTC CGACTTGGACCGGGTCACGGTGACCGTCACCGCCGCCTATGTGGATCAGAATCTGGCGGGGCTGGCGGCCGACGAGGATC TCTCCCGCTATATCCTCTAA Protein sequence : MKRSDAPVRFAQWMEDMSEITPQRIVAELDKHIVGQDDAKRAVAIALRNRWRRSQIAEPMRSEITPKNILMIGPTGVGKT EIARRLAKLANAPFIKVEATKFTEVGYVGRDVESIIRDLADIGVKMAREQEMAKLADQAEAAAEERILDALLPPPSGFEE ETRSAASSKTREKFRDKLRAGELDDREIEIQLSATPLGVEIMAPPGMEEMSSQLQGLFQNLGQGRMKRRKLRIRDALQIL KDEEAAKRVNDEDLKLRAIENVEQNGIVFLDELDKVTKRGEAMGGADVSREGVQRDLLPIVEGSTVSTKHGAVRTDHILF IASGAFHLSKPSDLIPELQGRLPIRVELKALTTEDFVRILTEPDASLTDQYRALLGTEGVHLDFTEDGIRRLAEIAWQVN ERTENIGARRLHTVMERLLEDVSYNASDLDRVTVTVTAAYVDQNLAGLAADEDLSRYIL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hslU | YP_003728753.1 | heat shock protein HslU | Not tested | cag PAI | Protein | 2e-94 | 48 |
