Gene Information

Name : Thivi_1700 (Thivi_1700)
Accession : YP_006413799.1
Strain : Thiocystis violascens DSM 198
Genome accession: NC_018012
Putative virulence/resistance : Virulence
Product : cobalamin/Fe3+-siderophore ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1836831 - 1837625 bp
Length : 795 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence : 
GTGACGCGCTTCGAGGTGGCCGGGCTCGATGTCCGTCTCGGCGGGAAGACGCTGGTGCATGACCTCTCGTTCGATCTGGG
CGAGGGCGAACTCCTTGGGCTCATCGGCCCCAACGGCGCCGGCAAGAGCAGCGTCCTCAAGGCGATCATGCAACTTCTGC
CGCACCGTGGTCGGATCCGGCTCGGCGGACGGGATCTGGCGGCCCTGCCGGCACGCGAGCGCGCGCGTCGGCTTGCCTAT
CTGAGTCAGGACGACGGCGTGCAGTGGCCGATCTCGGTCCAGGATCTGGTCGCGCTCGGGCGCCATCCCTATCGCGGGAG
CTGGTGGCGGGGCGGCGGTACGCCGAGAACGGACGATCGGGACGCGATCGAGGGCGCGTTGCGGGCCACCGACGTCTGGG
ATCTGCGCGAGCGCCGGGTGACCGAACTGTCCGGGGGCGAGCGCGCGCGGGTCCGTCTGGCCCGGGTGCTCGCGGTCGAG
GCGCCGCTCATCCTGGCCGACGAGCCGGTCGCCGCGCTGGATCCCCGGCACCAGCTCCGGGTCATGTCGCTCCTGCGCGA
GCAGTGTCGGCAGGGACGGAGTCTGATCCTGGTGCTCCACGACCTGACCCTGGCGAGCCGCTTCTGCGACCGGCTCCTGC
TCCTGGATCGGGGCGAGCCGATCGCGTTGGGCCCGCCGGGCGAGGTTCTCACGCGCGAGAATCTACGGGAGGTCTATGGC
ATCCGCGCGGTCACGGGCGAGCATCAGCGGCAGGGTTATATTCTGCCCTGGGAGTGCGAGTCAGCCGCCGGATGA

Protein sequence : 
MTRFEVAGLDVRLGGKTLVHDLSFDLGEGELLGLIGPNGAGKSSVLKAIMQLLPHRGRIRLGGRDLAALPARERARRLAY
LSQDDGVQWPISVQDLVALGRHPYRGSWWRGGGTPRTDDRDAIEGALRATDVWDLRERRVTELSGGERARVRLARVLAVE
APLILADEPVAALDPRHQLRVMSLLREQCRQGRSLILVLHDLTLASRFCDRLLLLDRGEPIALGPPGEVLTRENLREVYG
IRAVTGEHQRQGYILPWECESAAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-21 41
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 1e-15 41
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-15 41
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-15 41
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 1e-15 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thivi_1700 YP_006413799.1 cobalamin/Fe3+-siderophore ABC transporter ATPase BAC0164 Protein 7e-22 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thivi_1700 YP_006413799.1 cobalamin/Fe3+-siderophore ABC transporter ATPase VFG1042 Protein 6e-22 41