Gene Information

Name : Thivi_1636 (Thivi_1636)
Accession : YP_006413741.1
Strain : Thiocystis violascens DSM 198
Genome accession: NC_018012
Putative virulence/resistance : Resistance
Product : Cd(II)/Pb(II)-responsive transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1777838 - 1778326 bp
Length : 489 bp
Strand : +
Note : PFAM: MerR family regulatory protein; MerR, DNA binding; TIGRFAM: Cd(II)/Pb(II)-responsive transcriptional regulator

DNA sequence : 
ATGCGCTCGATCAAGGCTGACGCAGCGGTGAGCGGAATGCGGATCGGCGAATTGGCGGCGGCGGCAGGGGTGGATGTGGA
GACCATCCGCTATTACGAGCGGCTCGGCCTGCTGCCCGCGCCGCCCCGACGGTCCAACGGCTATCGGACCTATGCCCGCG
ATCATCTGGAACGGCTCGCCTTCATCCGGCATTGCCGGGCGCTCGGCATGTCGCTGGCCGATGTGCAGCGGCTGCTGGAT
CTGCTGGCCCATCCCGAGGCCGATTGCCACGACGCGAACTGTCTGATCGATGCCCAGCTTGAACGGGTGCGGGAGCGTCT
TCAGGCCATGCAGATGCTGGAGCGGCAGTTGAGCGCCCTGCGCACGCGCTGCCGCTCGCAACACACCGCCGACACCTGCG
GCATCCTGCATGAGCTGGTCGCGGCGGCCCAGGGCGAGGGCTGCATCTGTCATCCGGGCGGGTCAGCGCCAACCGGAGCC
GGCGACTGA

Protein sequence : 
MRSIKADAAVSGMRIGELAAAAGVDVETIRYYERLGLLPAPPRRSNGYRTYARDHLERLAFIRHCRALGMSLADVQRLLD
LLAHPEADCHDANCLIDAQLERVRERLQAMQMLERQLSALRTRCRSQHTADTCGILHELVAAAQGEGCICHPGGSAPTGA
GD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadR ADZ05769.1 MerR family transcriptional regulator Not tested AbaR11 Protein 3e-31 47
cadR ACS32041.1 MerR family transcriptional regulator Not tested AbaR5 Protein 4e-31 47
ACICU_00234 YP_001844893.1 transcriptional regulator Not tested AbaR20 Protein 2e-31 47
ORF C98 AAN62191.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 9e-28 46
cadR ACN81029.1 MerR family transcriptional regulator Not tested AbaR5 Protein 2e-31 46
pbrR CAJ77021.1 transcription regulator Not tested AbaR1 Protein 3e-31 46
pbrR CAJ77094.1 Transcriptional regulator Not tested AbaR1 Protein 1e-31 46
cadR AGK36653.1 MerR family transcriptional regulator Not tested AbaR26 Protein 1e-31 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thivi_1636 YP_006413741.1 Cd(II)/Pb(II)-responsive transcriptional regulator BAC0301 Protein 4e-24 46
Thivi_1636 YP_006413741.1 Cd(II)/Pb(II)-responsive transcriptional regulator BAC0058 Protein 9e-30 46