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Name : Thivi_1311 (Thivi_1311) Accession : YP_006413451.1 Strain : Thiocystis violascens DSM 198 Genome accession: NC_018012 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 1423348 - 1424886 bp Length : 1539 bp Strand : - Note : PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial DNA sequence : ATGAACGAAGCCTCGACCGAGACCAATCCCAATCCGGCGCCGCATGATACGCAGGACGAAAACAAGCTGATCGCCCAACG GCGCGAGAAGCTGACGCAACTGCGCGAGCGGGGCATCGCCTTCCCGAACGACTTCCGGCGCGATGCGGTGGCCGGCGAAC TCCTGGCCGAGTACGGCGAGCAGGACGCCGAATCGCTAGCATCGCAAGAGCTGCGAGTGAAAGTGGCCGGGCGTCTGATG ACGCGCCGCGTCATGGGCAAGGCGAGTTTCGCACACCTTCAGGATCTGTCGGGGCGCATTCAGATCTTCGTCCAGCGGGA TCTGATCGGCGAGGATGCCTATGCCAGCTTCAAACGCGATCTGGATCTGGGCGATATCCTGGGCGCCGAGGGCGTGCTCT TCAAGACCAAGACCGGGGAGTTGTCGATCCGCTGCGACAGTCTCCGTCTGCTGACCAAGGCGCTGCGTCCGCTACCCGAA AAGTTCCACGGTCTGACCGACATGGAGAGCCGCTACCGTCAGCGCTATCTGGATTTGATCATGAACAGCGGGACGCGCGA GACCTTCCGCATCCGCACCGCCATCGTTCAGTTCATCCGCGAGTATCTCAACCGCCGGGGCTATCTGGAAGTCGAGACCC CGATGATGCAGGTGATCCCCGGCGGGGCGGTCGCGCGTCCCTTCGTGACCCACCATAACGCGCTGGACATGCAGTTGTTC CTGCGCATCGCCCCCGAGCTGTTTCTCAAGCGCCTCGTCGTCGGCGGTCTGGAAAAGGTCTACGAGATCAACCGCAATTT CAGAAACGAAGGCTTGTCGACCCGGCACAATCCCGAGTTCACCATGCTGGAGTTCTACGAAGCCTACGCGGACTATCGGG ATCTGATGGACCTGACCGAGGACATGCTGCGCCAGATGGCGCTCCAAGTGCTCGGGCGCACCCGGATCGAGTATCAGGGC GAGAGCTACGAGTTCGGTCAACCCTTCGCGCGGATGAGCGTGCGCGAGGCGATCCTGCGGTTTAATCCCGAACTGGAGCC CGCCGATGTCGACGTTCTGGAAAACGCCCGCGCGGTGGCCGCTCGCTTGAAGATCGCCCTCAAACCGACCTGGGGTCTGG GCAAGATTCAGATCGAGCTGTTCGAGCGGACGGTGGAAAGCCGGCTGCTGGATCCGACCTTCATCACCCAATATCCGACC GAGGTGTCGCCCCTGGCGCGGCGCAACGACGACAATCCCTTCGTCACCGACCGTTTCGAGTTCTTTGTCGGCGGTCGCGA GATCGCCAACGGCTTCTCCGAGCTGAACGACGCCGAGGATCAGGCCGAGCGTTTCCGGGCGCAGGTCGCCGAAAAAGATG CTGGCGATCTGGAGGCCATGTTCTTCGACGCCGACTATATCCGTGCCCTAGAGCATGGCATGCCGCCGACGGCGGGGGAG GGGATCGGCATCGACCGGCTGGTGATGCTCTTCACCGACTCACCCTCGATCCGCGACGTGCTGCTGTTTCCGCACATGCG CCCGGAGGCGGCGACCTGA Protein sequence : MNEASTETNPNPAPHDTQDENKLIAQRREKLTQLRERGIAFPNDFRRDAVAGELLAEYGEQDAESLASQELRVKVAGRLM TRRVMGKASFAHLQDLSGRIQIFVQRDLIGEDAYASFKRDLDLGDILGAEGVLFKTKTGELSIRCDSLRLLTKALRPLPE KFHGLTDMESRYRQRYLDLIMNSGTRETFRIRTAIVQFIREYLNRRGYLEVETPMMQVIPGGAVARPFVTHHNALDMQLF LRIAPELFLKRLVVGGLEKVYEINRNFRNEGLSTRHNPEFTMLEFYEAYADYRDLMDLTEDMLRQMALQVLGRTRIEYQG ESYEFGQPFARMSVREAILRFNPELEPADVDVLENARAVAARLKIALKPTWGLGKIQIELFERTVESRLLDPTFITQYPT EVSPLARRNDDNPFVTDRFEFFVGGREIANGFSELNDAEDQAERFRAQVAEKDAGDLEAMFFDADYIRALEHGMPPTAGE GIGIDRLVMLFTDSPSIRDVLLFPHMRPEAAT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 9e-148 | 58 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 4e-86 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Thivi_1311 | YP_006413451.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 5e-148 | 58 |
