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Name : Thivi_1181 (Thivi_1181) Accession : YP_006413334.1 Strain : Thiocystis violascens DSM 198 Genome accession: NC_018012 Putative virulence/resistance : Unknown Product : primary replicative DNA helicase Function : - COG functional category : - COG ID : - EC number : 3.6.1.- Position : 1274534 - 1275937 bp Length : 1404 bp Strand : - Note : PFAM: DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain; TIGRFAM: replicative DNA helicase DNA sequence : ATGTTCGAATCAGATGATGTCATGGCGACGCCCCCGGCCGATGCCGAGTTCGACGCCTTGCGTGTCCCGCCTCACAATAT CCACGCGGAGCAATCCCTGCTCGGCGCGCTGATGCTCGATAACAGCGCCTGGGACCGCGTCGCCGACATGGTGACCGAAG GCGATCTCTACCGGCGCGAGCATCGCTTGATCTTCGGCGCCATCGCCAAGCTCGCGGCGGGCGATCAGCCCTTCGATGTC GTCACCCTGGCCGAAACCCTGGAGCGCACCGAGCGGCTGGCGGATGCCGGCGGCCTGCCGTATCTCGGTACACTGGCCAA CGAGACCCCGAGCGCCGCCAATATCAAGGCGTATGCCAAAATCGTGCGGCAGACCTCGGTGCTGCGGCAGATGATTACGG CGGGCGTCGAGATCGCCGACAGCGGCTACAACCCCCAGGGGCGCGACGCCGCCGAATTGCTCGACGACGCGGAGCGACGG GTCTTCGCGATCGCCGAGCAGGAGGCGCGCGGCGGTGGCGGTTTCCAGCCCATCAAAACCCTGCTGAGCCGGGCGGTCGA GCGGATCGACTTGCTCTATCAACGTGACGAGGCGATCACCGGTCTTGCCACGGGTTTCTCGGACTTCGACGAGATGACCT CGGGACTGCAACCGGCGGATCTCATTATCGTGGCCGGCCGTCCCTCGATGGGCAAAACCAGTCTCGCGATGAACATGGCC GAGCATGTCGCGATTCAGTCCAAGCGTCCGGTCGCCATCTTCAGCATGGAGATGCCGGGCGATTCGCTCGCCATGCGCAT GATGTCCTCGCTGGGGCGGATCGATCAGCATCGGGTGCGGACCGGGAAGCTGGAGGACGACGAATGGCCGCGCTTGACCT CGGCGGTGAACATCCTCTCCGCCGCGCCCATGTTCATCGACGACACGCCGGCGCTGTCGCCCACCGAGGTGCGCGCGCGG GCACGGCGTCTCAAGCGTGACCAGAACGATCTGGGGCTGATCGTGCTGGACTATCTGCAATTGATGCAGGCGCCGGGCTC CACCGAAAACCGCGCGACCGAGATCTCGGCTATTTCGCGTTCGCTGAAGGCGCTGGCCAAGGAGCTGAACGTGCCCGTGA TCGCGCTCTCGCAGCTCAATCGCAGTCTCGAACAGCGTCCGAATAAACGCCCGGTGATGTCGGATCTGCGCGAATCGGGC GCCATCGAACAGGATGCAGATTTGATCGTCTTCATCTATCGCGACGAGGTCTACAACGAGGACAGCAACGACAAGGGGAT CGCCGAGATCATCATCGCGAAACAGCGCAACGGACCGATCGGCACCACGCGCCTGACCTTTCTCGGCAAATACACCAAGT TCGAGAATTATATCGGCAACTATTACGGTGAAGGCGGCTCCTGA Protein sequence : MFESDDVMATPPADAEFDALRVPPHNIHAEQSLLGALMLDNSAWDRVADMVTEGDLYRREHRLIFGAIAKLAAGDQPFDV VTLAETLERTERLADAGGLPYLGTLANETPSAANIKAYAKIVRQTSVLRQMITAGVEIADSGYNPQGRDAAELLDDAERR VFAIAEQEARGGGGFQPIKTLLSRAVERIDLLYQRDEAITGLATGFSDFDEMTSGLQPADLIIVAGRPSMGKTSLAMNMA EHVAIQSKRPVAIFSMEMPGDSLAMRMMSSLGRIDQHRVRTGKLEDDEWPRLTSAVNILSAAPMFIDDTPALSPTEVRAR ARRLKRDQNDLGLIVLDYLQLMQAPGSTENRATEISAISRSLKALAKELNVPVIALSQLNRSLEQRPNKRPVMSDLRESG AIEQDADLIVFIYRDEVYNEDSNDKGIAEIIIAKQRNGPIGTTRLTFLGKYTKFENYIGNYYGEGGS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 2e-106 | 51 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 7e-96 | 50 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 5e-95 | 48 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 4e-95 | 48 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 2e-86 | 47 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 1e-93 | 46 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 6e-87 | 45 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 6e-87 | 45 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 7e-71 | 42 |
