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Name : Alfi_0997 (Alfi_0997) Accession : YP_006410042.1 Strain : Alistipes finegoldii DSM 17242 Genome accession: NC_018011 Putative virulence/resistance : Unknown Product : Retron-type reverse transcriptase Function : - COG functional category : - COG ID : - EC number : - Position : 1075840 - 1077657 bp Length : 1818 bp Strand : + Note : PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Type II intron maturase DNA sequence : ATGAGAAATCCAGAGAGAGTATTAAACAGTCTGTCAGAGCACAGCAAAGTTTCGAGCTACAAGTTTGAACGGCTCTACAG GGTTCTATTCAATTCGGAGATGTTTCTCCTCGCCTACCATAATATACAAGGTAGGCAGGGAAATATGACGGAAGGTTCCG ACGGTAAAACTATCGACGGAATGAGCCTGAAACGGATTGAAAATTTGATTGATGCGCTCAAAGATGAGTCGTACCAACCA AAACCGGCAAGAAGGACGTACATCCCGAAGAAAAACGGGAACATGCGACCTCTCGGCATACCGTCTATCGACGACAAATT AGTGCAGGAGGTATTGCGAATGCTGTTGGAAGCAATTTATGAAGGTAGTTTTGAGAACACCTCGCACGGTTTCCGACCCA AACGCAGCTGCCACACCGCACTGATACAGGTGCAGAAGAATTTTACTGCGGCCAAGTGGTTTATCGAGGGCGACATTGAA GGATTCTTCGATAACATCAACCATGATGTACTTATCGGAATCTTGAAAGAACGTATCGCAGACGACCGCTTTATCCGGCT AATGTGGAAATTTTTGAAAGCTGGCTACATCGAAGATTGGACATTTCATAGAACATACAGCGGAACACCGCAAGGTGGCA TCATTAGCCCGATACTGGCTAATATCTATCTCGACAAGCTGGATAAGTACATGAAAGAGTATGCCTGTCAATTCGATAGA GGCGACAGACGGGCAATGAACCTTGAGTACAAACGGTATTCCAGGAAAATTTGGTGGCTCGGCACAAAGCTGAAGCAAAC CAAGGATAAAGATACTCGGAAGGAACTGATTGACGCGATTAAGCAACATCAGAAAAACAGGATGCACTTACCCTCTGTCG ATGAAATGGACGAGGGATATAGACGGATTAAGTATGTGAGGTATGCCGATGATTTTATTATCGGAGTGATTGGCAGTAAA TCGGACTGTGAGGCCATCAAAGAGGATATTAAGAATTTCCTCGGCGAGAAACTGAAATTGACGCTCTCCGAAGAAAAGAC CTTAATCACGCACGGCAATAGAAAGGCAAAATTCCTCGGCTATGAAATCTATGTCCGACCATTCACGGATAAGACGTTAA GAGGCGAGAAATCGGGAGTACTTATTAAGGCTTACGGCAAAAAGGTAGTGTTGGAAGTGCCAATGTCCACAATGCGGGAT AAACTTCTCTACTACGAGGCGATGGAAATTCATCAATTCGAGGGTAAAGCGAAATGGAAACCCACAAGCCGGACAAAGTT GCTACATCTGGACGACCTCGAAATACTGGATGCCTATAACAGAGAAATCCGAGGTTTTGCAAACTATTTTTCTATCGCAA ATAACAGTTCACACCTGAATTCTTTCAAGTACATCATGCAATACAGTCTGTATAAGACTTTTGCACGAAAGTACAGTACG ACAGCCCGAAAGATTATCGCAAAGTATCGACATCACAAAGATTTTGCGGTTTTCTATGAGGACAAGAAAGGAGGAAAGAA GATGCGGGTATTCTTCAACGGGAGCTTTAAGCGTAAAACAACCGCGATGGACGCGAGTTGTGATTATGTAGCCAACACGA TTTTCAATACCACTGTATCAAGCCTTATACAAAGGTTAAAAGCGGGTAAGTGTGAATTGTGTGGCGCAACGGAAAACATT GAAATACACCACGTCAAAAGACTCAAAGACTTAAAAGGCAAAGAGCCATGGAAAATCCAAATGATTGGACGTCAGAGAAA GACGTTAGCTGTATGTATTCCCTGTCACAACAAGATACATCACGGGATAATAGACTGA Protein sequence : MRNPERVLNSLSEHSKVSSYKFERLYRVLFNSEMFLLAYHNIQGRQGNMTEGSDGKTIDGMSLKRIENLIDALKDESYQP KPARRTYIPKKNGNMRPLGIPSIDDKLVQEVLRMLLEAIYEGSFENTSHGFRPKRSCHTALIQVQKNFTAAKWFIEGDIE GFFDNINHDVLIGILKERIADDRFIRLMWKFLKAGYIEDWTFHRTYSGTPQGGIISPILANIYLDKLDKYMKEYACQFDR GDRRAMNLEYKRYSRKIWWLGTKLKQTKDKDTRKELIDAIKQHQKNRMHLPSVDEMDEGYRRIKYVRYADDFIIGVIGSK SDCEAIKEDIKNFLGEKLKLTLSEEKTLITHGNRKAKFLGYEIYVRPFTDKTLRGEKSGVLIKAYGKKVVLEVPMSTMRD KLLYYEAMEIHQFEGKAKWKPTSRTKLLHLDDLEILDAYNREIRGFANYFSIANNSSHLNSFKYIMQYSLYKTFARKYST TARKIIAKYRHHKDFAVFYEDKKGGKKMRVFFNGSFKRKTTAMDASCDYVANTIFNTTVSSLIQRLKAGKCELCGATENI EIHHVKRLKDLKGKEPWKIQMIGRQRKTLAVCIPCHNKIHHGIID |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EFAU085_00689 | YP_008394213.1 | HNH endonuclease domain protein | Not tested | Not named | Protein | 2e-118 | 45 |
