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Name : Alfi_0352 (Alfi_0352) Accession : YP_006409437.1 Strain : Alistipes finegoldii DSM 17242 Genome accession: NC_018011 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.11 Position : 389299 - 390570 bp Length : 1272 bp Strand : + Note : PFAM: Seryl-tRNA synthetase N-terminal domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: seryl-tRNA synthetase DNA sequence : ATGCTTACGCTAAAGCAAATCCGCGATGACAAAGAGGCCGCGATCCGCAAACTGGCCAAAAAGGGCGTGGACGCCGCACC CGTCATCGAAAAGATCGAAACGCTGGACGACCGCCGCAAGGCAATTCAGGTAGAATTGGACAATACGCTGGCCGCGCAGA ACAAAGCCGCCAAGGAGATCGGCGCGCTGATGGGTCAGGGCCGCCGCGAAGAGGCCGAGGAGCGCAAACGCTTCGTCGCC GACCTCAAGGAGAAATCGAACCGCCTGCAGGCCGAATCGCGCGAAGTGCAGGAGGAGCTGCAGGCCGCGATCGTCACGCT GCCCAACTTCCCCGCCGAGATCGTCCCGGAGGGCAAAACCGCAGAGGACAACCTCGTCGTAAAACTCGTCGAAAGCTACA CCGAACTGCCCGAAAACCCGCTGCCCCACTGGGAGCTGGCCCGCAAATACGACATCATCGACTTCGATCTGGGCGTGAAG CTCACGGGCGCCGGATTCCCCGTCTACAAGGGCAAGGGCGCACGCCTGCAGCGGGCGCTGATCAACTACTTCCTCGACTG CAACACCAAAGCCGGCTATCTCGAAGTCGAGCCGCCGATCATGGTCAACGAGGCTTCGGGCTTCGGTACGGGACAACTCC CCGACAAGGAGGGGCAGATGTACCACGCCACGGCCGATAACTTCTACCTGATCCCCACGGCCGAAGTTCCCGTCACGAAC ATCTACCGCGACGTGATCCTCGACGAAAAGGATTTCCCCGTAAAAATGACCGCCTACACCCCCTGCTTCCGCCGCGAAGC CGGTTCCTACGGCAAGGACGTGCGCGGCCTGAACCGCCTGCACCAGTTCGACAAGGTCGAGATCGTGCAGCTGAGCCTGC CCCAGAACTCGTACGAAGCGCTGGACGGCATGGTGGCGCATGTCGAGTCGATCGTCAAGTCGCTCGGCCTGCCCTACCGC ATCCTGCGTCTGTGCGGCGGCGACATGTCGTTCACTTCGGCGCTCACCTACGACTTCGAGGTCTACTCCGAAGCGCAGAA ACGCTGGCTGGAGGTTTCCTCCGTCTCGAACTTCGAATCGTTCCAAGCCAACCGTCTCAAGCTCCGCTACAAGGACGCCG ACAAGAAAACCCAGCTGGCGCACACGCTCAACGGCTCGTCGCTGGCCCTGCCGCGCATCGTCGCCGCCCTGCTCGAAAAC TTCCAGACCCCCGAAGGCATCCGCATTCCCGAAGCGCTGATTCCCTATACGGGTTTTGATATTATCAAATAA Protein sequence : MLTLKQIRDDKEAAIRKLAKKGVDAAPVIEKIETLDDRRKAIQVELDNTLAAQNKAAKEIGALMGQGRREEAEERKRFVA DLKEKSNRLQAESREVQEELQAAIVTLPNFPAEIVPEGKTAEDNLVVKLVESYTELPENPLPHWELARKYDIIDFDLGVK LTGAGFPVYKGKGARLQRALINYFLDCNTKAGYLEVEPPIMVNEASGFGTGQLPDKEGQMYHATADNFYLIPTAEVPVTN IYRDVILDEKDFPVKMTAYTPCFRREAGSYGKDVRGLNRLHQFDKVEIVQLSLPQNSYEALDGMVAHVESIVKSLGLPYR ILRLCGGDMSFTSALTYDFEVYSEAQKRWLEVSSVSNFESFQANRLKLRYKDADKKTQLAHTLNGSSLALPRIVAALLEN FQTPEGIRIPEALIPYTGFDIIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-78 | 47 |
