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Name : Alfi_3211 (Alfi_3211) Accession : YP_006412126.1 Strain : Alistipes finegoldii DSM 17242 Genome accession: NC_018011 Putative virulence/resistance : Unknown Product : Retron-type reverse transcriptase Function : - COG functional category : - COG ID : - EC number : - Position : 3635338 - 3637137 bp Length : 1800 bp Strand : - Note : PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Type II intron maturase DNA sequence : ATGAGAAGTCCCGCAAGAGTATTAAACAGTCTGACAAAGCATAGTCAAACCACGGAATACAGGTTTGAGAGGCTTTATCG TATTCTTTTCAATGAGGAAATGTATTATCTGGCTTATCAGCGAATATATGCCAAGCCGGGTAATATGACACAAGGTGCAG ACGGAGAAACCATCGACCGTATGAGCCTTCCCCGCATTGAGAAACTGATCCTTTCGTTGAAAGACGAAAGCTACTCTCCC CAGCCATCGAGAAGAGTACACATCCCGAAGAAAAACGGAAAGACACGACCTCTCGGCGTACCCTCTTTCGACGACAAACT GGTGCAGGAGGTAGTACGAATGGTACTGGAAGCTATTTACGAAGGTCACTTTGAAGATACTTCGCACGGCTTCCGTCCGC ATCGCAGCTGCCACACCGCATTGAATGCCGTACAGAAGACTTTTACGGGTAAGAAGTGGTTCATCGAAGGAGATATAAAA GGTTTCTTCGACAATGTCAATCATGATATTCTGATCGACATCTTGAAGGAACGTATCTCCGACGAACGATCCATACGGCT TATCCGGAAGTTCCTCAGGGCGGGTTATCTGGAACAATGGCGATTTCATGGAACGTACAGCGGCATGCCGCAAGGCGGAA TTATCAGTCCGGTACTGGCGAACATTTACTTGGACAAGCTGGATAAGTACATGAAAGAATATGCCACCGGATTCGACAGG GGTAACAGGGTAAGAGCGTGCCGTGAATACGAAGCTCTCACTTACCAAAAGAGGCTGGTTATGCGTGAACTCAAAACAGC GACAAATGATGTAGAAAGAAAAGTGCTCGTCAAACGGCTCAAAGAGATAGACAAAACCCGATCCGCGATGCCGTGCTTCG ACCCTATGGACGGAAACTTCAAGAGGCTTAAATATGTGAGGTATGCCGACGACTTCCTCATTGGAATTATCGTAAGTAAA GTAAAGATCAAGGACGATATAAAGCGTTTCCTTGCAGACAGACTGGCATTGGAACTATCGGACGAGAAAACGCTCGTCAC TCATACTGAAAAGCCTGCAAAATTCCTCGGATATGAGGTGACTGTCCGCAAGTCGAACCTGCAAAAACGGAACAAACGGG GAAGCCTGTCCCGTGTGTATGGAAACAAGGTCAGATTAAAGGTGACGACCGAAGTAATAAAGAAAAAATTGCTGGAACTC GGCGTGCTGAAATTCAGCTATCATAACGGGCACGAGCAATGGATTCCCAAACACCGGTCGGAACTTATCAATAATGACGA CCTTGAAATCCTTGACAGTTACAATGCCGAGATCAGAGGGTTTTACAACTATTACTCGATAGCTAACAACGCTTCTGAAC TGAACACTTTTCACTACATCATGCAGTACAGTATGTACAAAACCTTTGCCGGGAAATACCGAACCACAGTAAGACGAATT TGCCGGAAATACAAACGCAACGGAGTCTTTACAGTCGGGTATACGGTAAAAAACGGCAAAGCAAAAGAACGTCGCCTATA CAATGAAGGGTTCAAAAGAAAAAGACCTTCCTATGATCGGTCGGTTGACAGATGCCCGAATCCAATGCCCGGCGTCAGCA CCACAAGCCTTATAGATAGGCTGAAAGCTCAGAAATGTGAGTTGTGCGGTGCTACGGATAATCTGGTTATGCACCATGTG CGTAAACTCGGAGAACTGAAAGGCAAGGAGAATTGGGAAAAACTGATGATTGCCAGACGGCGTAAGACTATGGCCGTTTG CGGAAGCTGTCATCAAAAGATACATCATGGAACGTTTTAG Protein sequence : MRSPARVLNSLTKHSQTTEYRFERLYRILFNEEMYYLAYQRIYAKPGNMTQGADGETIDRMSLPRIEKLILSLKDESYSP QPSRRVHIPKKNGKTRPLGVPSFDDKLVQEVVRMVLEAIYEGHFEDTSHGFRPHRSCHTALNAVQKTFTGKKWFIEGDIK GFFDNVNHDILIDILKERISDERSIRLIRKFLRAGYLEQWRFHGTYSGMPQGGIISPVLANIYLDKLDKYMKEYATGFDR GNRVRACREYEALTYQKRLVMRELKTATNDVERKVLVKRLKEIDKTRSAMPCFDPMDGNFKRLKYVRYADDFLIGIIVSK VKIKDDIKRFLADRLALELSDEKTLVTHTEKPAKFLGYEVTVRKSNLQKRNKRGSLSRVYGNKVRLKVTTEVIKKKLLEL GVLKFSYHNGHEQWIPKHRSELINNDDLEILDSYNAEIRGFYNYYSIANNASELNTFHYIMQYSMYKTFAGKYRTTVRRI CRKYKRNGVFTVGYTVKNGKAKERRLYNEGFKRKRPSYDRSVDRCPNPMPGVSTTSLIDRLKAQKCELCGATDNLVMHHV RKLGELKGKENWEKLMIARRRKTMAVCGSCHQKIHHGTF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EFAU085_00689 | YP_008394213.1 | HNH endonuclease domain protein | Not tested | Not named | Protein | 6e-123 | 46 |
