Gene Information

Name : Alfi_2853 (Alfi_2853)
Accession : YP_006411788.1
Strain : Alistipes finegoldii DSM 17242
Genome accession: NC_018011
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3224659 - 3225309 bp
Length : 651 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence : 
ATGATAAAAGTTACCGACATACACAAGCGTTTCGGCGACCTCGAAGTGCTCAAGGGCGTCTCGCTCGACGTCGCCGAAGG
CGAAGTCGTCTCGATCGTCGGCGCCAGCGGCGCGGGCAAGACTACGCTGCTGCAAATCGTCGGCACGCTTTCGCGCCCCG
ACGCGGGCCGTGTCGAGATCGACGGACAGGACGCCTTTTCGCTGGGCGACAAGGCGCTGTCCCGCTTCCGCAACGAACGT
ATCGGCTTCGTCTTCCAGTTCCACCACCTGCTGCCCGAATTCACGGCTTTCGAGAACGTCTGCATTCCGGGGTTTATCGG
CCGCCGTCCGCGTGCGGAGGTCGAACGCCGCGCCGCCGAACTGCTGGAGATGATGAACCTCACGCCGCGCCGCGGCCATA
AACCCGGCCAGTTGTCGGGCGGCGAGCAGCAGCGCGTGGCTATTGCCCGCGCGCTTGTCAATTCGCCCGCCGTACTGCTG
GCCGACGAACCTTCGGGCAACCTCGATTCGCACAACCGCGACGAGATACACCGCCTTTTCTTCGAGCTGCGCGACCGGCT
GGGGCAGACCGTCGTGATCGTCACCCACGACGAGCATCTGGCGGCGATGGCCGACCGGAAGATCACCATGTCGGACGGCC
GGATTCTGTAA

Protein sequence : 
MIKVTDIHKRFGDLEVLKGVSLDVAEGEVVSIVGASGAGKTTLLQIVGTLSRPDAGRVEIDGQDAFSLGDKALSRFRNER
IGFVFQFHHLLPEFTAFENVCIPGFIGRRPRAEVERRAAELLEMMNLTPRRGHKPGQLSGGEQQRVAIARALVNSPAVLL
ADEPSGNLDSHNRDEIHRLFFELRDRLGQTVVIVTHDEHLAAMADRKITMSDGRIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 3e-15 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Alfi_2853 YP_006411788.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene798.p Protein 3e-36 45
Alfi_2853 YP_006411788.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 6e-38 43
Alfi_2853 YP_006411788.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 1e-30 43