Gene Information

Name : Alfi_2686 (Alfi_2686)
Accession : YP_006411631.1
Strain : Alistipes finegoldii DSM 17242
Genome accession: NC_018011
Putative virulence/resistance : Virulence
Product : peroxiredoxin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3033249 - 3033755 bp
Length : 507 bp
Strand : +
Note : PFAM: Redoxin

DNA sequence :
ATGTCAGAGACAAAATTCAAAGGTTCGCCCGTGCGTGTCGCCGGCGAATTCATAACGGCGGGCGCCGAAGCTCCCGCTTT
CGAACTGGTTAAGAGCGATCTCTCGCCCCTGCGTCTGAGCGACCTCAAAGGCAAGCGCGTCGTGCTGAACATCTTCCCAA
GTCTCGATACGAGCGTATGCGCGACTTCGGTGCGCAAATTCAACAAGCTGGCCGCTTCGCTGCCCGATACCGTCGTTGTG
GCCGTGTCGAAGGACCTGCCTTTCGCGCATGCCCGTTTCTGCACGACCGAGGGCATCGAGAATGTCGTGCCCGCATCGGA
TTTCCGGGCATCGGGATTCGACGGGGCTTATGGCGTGCTGATGGCCGACGGACCGCTGGCCGGCCTGCTGGCGCGTGCCG
TCGTGGTGATCGACAAGGCGGGCAGGGTGGTGTACACCGAGCTGGTGCCGGAGATTACCGAGGAGCCTGACTACGACAAG
GCCGTCGAAGCCGTGAAAGCTAACTAA

Protein sequence :
MSETKFKGSPVRVAGEFITAGAEAPAFELVKSDLSPLRLSDLKGKRVVLNIFPSLDTSVCATSVRKFNKLAASLPDTVVV
AVSKDLPFAHARFCTTEGIENVVPASDFRASGFDGAYGVLMADGPLAGLLARAVVVIDKAGRVVYTELVPEITEEPDYDK
AVEAVKAN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 1e-31 46
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 8e-32 46
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 9e-32 46
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 5e-32 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Alfi_2686 YP_006411631.1 peroxiredoxin VFG0087 Protein 4e-32 46