|
Name : Alfi_2107 (Alfi_2107) Accession : YP_006411086.1 Strain : Alistipes finegoldii DSM 17242 Genome accession: NC_018011 Putative virulence/resistance : Unknown Product : Retron-type reverse transcriptase Function : - COG functional category : - COG ID : - EC number : - Position : 2377821 - 2379626 bp Length : 1806 bp Strand : + Note : PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Type II intron maturase DNA sequence : ATGAGAAGTCCGGAAAGAGTATTAAACAGTCTGAACGAACACAGTAAGGATTCGAGCTACAAGTTCGAACGCCTTTACCG GATTCTGTTCAACGAAGAGTTGTTCTATGTTGCCTACCAAAAGATCGCATCGAACGGAGGCAGTACGACCAAAGGCTCCG ACGGTCGCAGTATCGACGAGATGAGCCTTGCCCGGATCGAAACGCTGATAGCCTCGTTGAAAGACGAAAGTTATCAGCCT CACCCGTCGCGGAGGGTGCATATCCCGAAGAAAAACGGGAAAACGCGCCCTCTGGGAATACCGGCTTTTGAAGACAAGCT GGTGCAGGAGGTAGTCCGCATGATTCTGGAAGCCATTTACGAGGGACATTTTGAGACCACCTCGCACGGTTTCCGACCTA AACGGAGCTGTCACACAGCATTACTTCATATTCAAAAGACGTTCAGCGGGGCGAAATGGTTTATCGAGGGCGACATCAAA GGGTTCTTCGACAACATTGACCATGATGTACTTGTCGGAATCCTGCGGGAGCGCATTTCAGATGACCGTTTTATCCGTCT GATACGGAAATTCCTGAAAGCGGGATACGTCGAGGATTGGACGTTTCACAACACTTACAGCGGAATGCCGCAGGGAGGTA TCGTCAGCCCGATTCTGGCGAATATATACCTCGATAAATTAGACAAGTACGTGAAAGAGTATATCCGACATTTCGACATG GGAACCAAACGCAGGCCGGGCAAAGAGAGCAACGATTTGGCCAATGAACGAAAACGGACTGTGCGGAAACTGAAAAAGGT AAAAGACGGGACTGAGAAGGCGGCTTTGGTCGCAAGACTCAAAGCCATCGAACAGGAACGTGCAGCATTTCCAAGCGGAG ATGAAATGGACGGAAGTTACCGCAGGCTCAAATACATCCGTTACGCCGACGATTTTATTCTGGGTGTAATCGGCAGCAAA GAGGATGCACTGCGGATAAAGGAGGATATTAAATCATTCCTATCCGAAAGCCTCGCCCTCGAACTGTCCGAAGAAAAGAC GCTGATAACCCATACGGGTAAATCGGCGAAATTTCTCGGATATGAGATTACGGTAACACGGAACAATCATCAACGACGGG ATGTGCAAGGACGTCTGCGACGCACCTACGGCAAGCGTGTCCGGCTGAATGTCAGCATGGCAACGCTGCGGGACAAACTT CTGGAATACGGAGCTATGGAAATCAAGCTCCGCAACGGGAAAGAGATTTGGAAACCCAAATGCCGTTCAGGATTGATATT CAACGACGATCTTGAAATCCTCGACCGATACAATCGGGAAACAGTGGGATTTTGCAACTATTACCTGATCGCCAACAACT GCGTCGTACTGCACAACTTCAGATATATCATGGAGTACAGCATGTATAAAACATTTGCGGGCAAATATAGGAGCACGGTA CGAAAAATCAACAAAAAGTACCGTCTCAACAAACTGTTCACCGTAAAGTACGAGCAGAAAGGGGTAATCAAGTCCCGAAC CTTTTACAAGACAAGTTTCAAACGCCGGACAACGGCGTTCAACGGAAGCTGCGACATCGAACCGTACTCTATTGCAGACG TGAGCCGAACCAATTTGACGGACAGGCTCAAAGCGGAAAAATGCGAATTGTGTGGGGCAACGGGCAAGCTGATTATGCAC CATGTCCGCAACCTCAAAGACCTGAAAGGGAAAGAGAGTTGGAAACGGCTCATGTCAGCCCGAAAACGCAAGACCATTGC GTTGTGTCCGAGTTGCCACAGGCTGCGGCATCTGGGAAAAGTTTAG Protein sequence : MRSPERVLNSLNEHSKDSSYKFERLYRILFNEELFYVAYQKIASNGGSTTKGSDGRSIDEMSLARIETLIASLKDESYQP HPSRRVHIPKKNGKTRPLGIPAFEDKLVQEVVRMILEAIYEGHFETTSHGFRPKRSCHTALLHIQKTFSGAKWFIEGDIK GFFDNIDHDVLVGILRERISDDRFIRLIRKFLKAGYVEDWTFHNTYSGMPQGGIVSPILANIYLDKLDKYVKEYIRHFDM GTKRRPGKESNDLANERKRTVRKLKKVKDGTEKAALVARLKAIEQERAAFPSGDEMDGSYRRLKYIRYADDFILGVIGSK EDALRIKEDIKSFLSESLALELSEEKTLITHTGKSAKFLGYEITVTRNNHQRRDVQGRLRRTYGKRVRLNVSMATLRDKL LEYGAMEIKLRNGKEIWKPKCRSGLIFNDDLEILDRYNRETVGFCNYYLIANNCVVLHNFRYIMEYSMYKTFAGKYRSTV RKINKKYRLNKLFTVKYEQKGVIKSRTFYKTSFKRRTTAFNGSCDIEPYSIADVSRTNLTDRLKAEKCELCGATGKLIMH HVRNLKDLKGKESWKRLMSARKRKTIALCPSCHRLRHLGKV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EFAU085_00689 | YP_008394213.1 | HNH endonuclease domain protein | Not tested | Not named | Protein | 4e-119 | 46 |
