|
Name : Alfi_1804 (Alfi_1804) Accession : YP_006410816.1 Strain : Alistipes finegoldii DSM 17242 Genome accession: NC_018011 Putative virulence/resistance : Unknown Product : type I restriction-modification system methyltransferase subunit Function : - COG functional category : - COG ID : - EC number : - Position : 2016561 - 2018114 bp Length : 1554 bp Strand : + Note : PFAM: N-6 DNA Methylase; HsdM N-terminal domain; TIGRFAM: type I restriction system adenine methylase (hsdM) DNA sequence : ATGGCAGCGATGAATACAGCCGACATCGGCTTTGAAAAGGAAATATGGAAGGCGGCGGATAAGATGCGCGGAAATATTGA TGCATCGGAATATAAATCCGTTGTATTGGGACTTATTTTCCTGAAATACATCTCGGACAAATTCGAAGCTAAATATCAAC AGCTTGTTGCCGAAGGAGAGGGCTTTGAGGAAGACAAGGATGAGTATTTGAGTAATAAAAATGAGAAGGGTAGTTATGAT CCGGTTTTCTATGTCCCTGCGGAAGCCCGTTGGGAAGCTATTGCCATCCATGCACACTCTCCTGAAATTGGAACGATCAT CGACAATGCGATGCGGGCAATTGAGAAGGAGAATAAGCGTCTGAAAGATATTCTTCCGAAAAACTTTGCGCGTCCCGAGC TCGACAAACGCCGCTTGGGTGAAGTTGTCGATTTGTTTACAAATATTCGGATGCATGAGCACGGCGATTCGAAGGATATT TTGGGTCGTGCTTACGAATATTGTCTTTCGAAGTTTGCTGAGGCCGAAGGAAAATTGGCAGGTGAATTTTATACTCCGGC TTGTATCGTTAAGACGTTGGTGAACGTATTACAACCTTATAAAGGTCGTGTTTACGATCCTTGCTGCGGTTCGGGTGGTA TGTTTGTACAGTCTGCACAATTCATCGAGAACCACTCTGGAAATATCAATAATATATCAGTCTATGGTCAGGATTCCAAT CCTACGACATGGAAAATGGCGCAGATGAACTTGGCGATTCGCGGTATCGAGGCCGATCTCGGGCGATATAATGCGGATAC CTTTTTCAATGATTGCCATCCGACTCTGAAGGCCGATTTCGTGATGGCCAATCCTCCGTTCAATCTGAGCGATTGGGGGG CGGATAAGCTGGCGGATGATGTGCGTTGGAAATACGGTACACCGCCCAATGGCAATGCCAACTTTGCGTGGATTCAGCAT ATCATCCACCACCTTGCCCCGACGGGACGTGCGGGCGTTGTGCTGGCCAACGGCTCGCTGTCGAGCCAGAGTGGCGGTGA GGGCGAGATTCGGCGTAAATTGGTAGAGGCTGATTTGGTGGATTGTGTTATCGCTATGCCGCCGCAGTTGTTCTATACTA CACAAATTCCCGTGTCGATTTGGTTTTTCAATAAAAACAAGCAACAAAAGGGCAAAACGCTCTTTATCGATGCTCGCAAC TTAGGTACAATGGTAACGCGCAAACTGCGCGAATTGACCGATAGTGACACGGTCGATCCGATAAAGCGCGGCGATATTCA GCGCATTGCCGACACCTATAATGCCTATGTTGCTGGAAAATTGGAGAATGAAAAAGGATTTTGTGCGGTTACCTCTGTCG CAGAAATTGCCAAGCAGGATTTTATTCTCACGCCCGGTCGCTATGTGGGCATTGCTGCGCAAGAGGAGGACACCGAACCG TTTGAGGAGAAAATGACACGCTTGACGGGCGAGCTTTCTGGACTATTTGAAAAGTCGCACGAGCTGGAGGCAGAGATCAA AAAACAGTTAGGTAGTATTGGGTATAAATTGTAG Protein sequence : MAAMNTADIGFEKEIWKAADKMRGNIDASEYKSVVLGLIFLKYISDKFEAKYQQLVAEGEGFEEDKDEYLSNKNEKGSYD PVFYVPAEARWEAIAIHAHSPEIGTIIDNAMRAIEKENKRLKDILPKNFARPELDKRRLGEVVDLFTNIRMHEHGDSKDI LGRAYEYCLSKFAEAEGKLAGEFYTPACIVKTLVNVLQPYKGRVYDPCCGSGGMFVQSAQFIENHSGNINNISVYGQDSN PTTWKMAQMNLAIRGIEADLGRYNADTFFNDCHPTLKADFVMANPPFNLSDWGADKLADDVRWKYGTPPNGNANFAWIQH IIHHLAPTGRAGVVLANGSLSSQSGGEGEIRRKLVEADLVDCVIAMPPQLFYTTQIPVSIWFFNKNKQQKGKTLFIDARN LGTMVTRKLRELTDSDTVDPIKRGDIQRIADTYNAYVAGKLENEKGFCAVTSVAEIAKQDFILTPGRYVGIAAQEEDTEP FEEKMTRLTGELSGLFEKSHELEAEIKKQLGSIGYKL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hsdM | YP_251979.1 | type I restriction-modification system DNA methylase | Not tested | SCCmec | Protein | 2e-143 | 57 |
| hsdM | BAH57701.1 | type I restriction-modification system DNA methylase | Not tested | Type-VII SCCmec | Protein | 5e-144 | 57 |
| hsdM | BAD24842.1 | HsdM protein | Not tested | Type-V SCCmec | Protein | 1e-141 | 56 |
| api49 | CAF28523.1 | putative HsdM-like N-methyl transferase | Not tested | YAPI | Protein | 8e-115 | 48 |
