Gene Information

Name : Alfi_1014 (Alfi_1014)
Accession : YP_006410055.1
Strain : Alistipes finegoldii DSM 17242
Genome accession: NC_018011
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1092201 - 1092764 bp
Length : 564 bp
Strand : +
Note : PFAM: ParB-like nuclease domain

DNA sequence :
ATGAATCGCTATTACGAACATCCGACCGAGAAGAACTTCCGGAGCCCTGTCTATAACGTCCGCGCCGTACCGGTGGAGAA
GATCGTGGCGAACAGCTACAACCCCAATGTCGTGGCGCCGCCCGAAATGAAACTGCTGGAACTGTCGATCTGGGAAGACG
GCTACACGATGCCGTGCGTCTGCTATTACGACGCCGAAAGGGACTGTTACGAACTGGTGGACGGCTACCACCGCTATCTG
GTGCTCAAAACCTCGAAGCGCATCTACGAACGCGAACGGGGGCTGCTGCCCGTCACCGTGATCGAAAAGGACCTTTCGAA
CCGCATGGCCTCGACCATCCGCCACAACCGGGCGCGGGGAACGCACAACGTCGAGCTGATGAGCGAGATCGTCGCCGAAC
TGACCCGCGCGCGGATGTCCGACCAGTGGATCATGCGTCATATCGGCATGGACCGCGACGAGTTGCTGCGATTGAAACAG
ATCACGGGCCTCGCCGAACTCTTCTCCGACAAGGAGTTCAGCCTCGGCGATGCCGACGAGGACACGGTCGAATTTGTGCT
ATAA

Protein sequence :
MNRYYEHPTEKNFRSPVYNVRAVPVEKIVANSYNPNVVAPPEMKLLELSIWEDGYTMPCVCYYDAERDCYELVDGYHRYL
VLKTSKRIYERERGLLPVTVIEKDLSNRMASTIRHNRARGTHNVELMSEIVAELTRARMSDQWIMRHIGMDRDELLRLKQ
ITGLAELFSDKEFSLGDADEDTVEFVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
M5005_Spy_0164 YP_281528.1 parB-like nuclease Not tested Not named Protein 1e-47 65
EF0607 NP_814365.1 ParB-like nuclease domain-containing protein Not tested Not named Protein 1e-34 56
ef0120 AAM75321.1 EF0120 Not tested Not named Protein 8e-35 56
STY4584 NP_458668.1 conserved hypothetical protein Not tested SPI-7 Protein 3e-27 50
t4278 NP_807876.2 hypothetical protein Not tested SPI-7 Protein 2e-27 50
Z1644 AAQ19140.1 putative ParB-like nuclease Not tested PAI I CL3 Protein 3e-25 49
ibrB ADD91736.1 predicted transcriptional regulator IbrB Not tested PAI-I AL862 Protein 3e-25 49
Z1204 NP_286739.1 hypothetical protein Not tested TAI Protein 5e-25 48
Z1644 NP_287147.1 hypothetical protein Not tested TAI Protein 5e-25 48
z1204 CAD33764.1 Z1204 protein Not tested PAI I 536 Protein 1e-25 47
ORF_30 AAZ04440.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 6e-17 45
APECO1_3503 YP_854305.1 hypothetical protein Not tested PAI I APEC-O1 Protein 8e-17 45
c5208 NP_757056.1 hypothetical protein Not tested PAI II CFT073 Protein 8e-17 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Alfi_1014 YP_006410055.1 transcriptional regulator VFG1505 Protein 6e-26 47