Gene Information

Name : Sulba_0634 (Sulba_0634)
Accession : YP_006403517.1
Strain : Sulfurospirillum barnesii SES-3
Genome accession: NC_018002
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : -
COG ID : -
EC number : 6.1.1.6
Position : 595982 - 597553 bp
Length : 1572 bp
Strand : -
Note : PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial

DNA sequence :
ATGTTCCAAAGAAAACAGCAACCATTAGGAAAAGAGGATACTATTTTGATATTTCAAGACCAATACCAACAGCAACGCAT
CGAAAAAGGAAAAGCGCTCCATGCATTAGGCCGCAATCCTTATCGACACAACATTACAAAAGATACCAGCACAAAAGAGT
TTTTGGAGTGTTATGCGTATGTGATTGAGAGTGAATTAAAGCGTGATGAACATAAAAGCAATACCATTGTAGGTCGTATC
AAATTTTTGCGCCATATGGGCAAAGCTGCTTTTGCAAAAATCGAAGACGAACACGGTGTTGTGCAAATCTATTTTAGCCG
TGAATCCATTGGTGAAGCATGGTTTGATGAAGCAAAAAAACTGGTTGAAGTGGGTGATATTATCAGTGTAACAGGCTTTC
CTTTTGTTACAAAAACGGGTGAACTCTCTTTACATGTAAAGGTCATGGAGGTCGCAACAAAATCTATTATTCCTCTGCCT
GAAAAATTTCACGGATTGCAAGATAAAGAGCTTAGATACCGCAAACGCTATCTTGATATGATTATGAACGCAGATGTTCG
CAAAACCTTTAAGATCAGAAGTAAAATTGTCAGTGAAATCCGCCACTTTTTTGAAGAGCGTGACTTTTTAGAAGTTGAAA
CCCCAATGATGCATCCTATTGCAGGGGGAGCTAATGCTAAACCTTTTGTCACCCATCATAATGCCTTAGGTATTGATCGT
TACCTTAGAATTGCACCTGAGCTTTATCTCAAACGTCTTGTTGTTGGTGGTTTTGAAGCGGTTTTTGAAATCAACCGTAA
CTTTAGAAACGAAGGGATGGATCAAACCCATAACCCCGAATTTACGATGATTGAATTTTATTGGGCATACCACAACTATC
ATGATTTGATGCGTTTAACCGAAGAGATGTTTGATGTGCTCTTAAAAAAGCTCAAACTTCCACGTAAGCTTCCTTATGGC
GAAATGGAGATTGATTTTTCAAAACCATTCCGCAAAATCGCTTTTAGAGCGGCCCTTAGTGAAATTGGAGGCATCCCCGA
TGAAATTTTAGAGGATTGCCAAAAAATTATTGCGTATATTCAAAGTCAAGGATTTAGCGTTGAATCTAAATTGACATTGG
GTAAACTCTATGAAGAACTGTTTGATCTCTTTGTTGAAGAAAAACTCATTGATCCAACGTTTATTATTGATTATCCCATT
GAAATTAGCCCATTGGCACGAAGAAGTGAAAGTAATCCTAATATTGCTGAGCGTTTTGAGCTCTTTATTGCAGGGCGAGA
AATCGCCAATGGATTTAACGAACTTAATGATCCTATTGATCAATACGAACGATTTGCAAAACAGTTACAAGCCAAAAATG
CAGGGGATGATGAAGCCCACGAAATGGATGAAGACTATGTTCACGCACTTGGTTATGGCTTACCGCCAACAGCGGGACAA
GGTTTAGGCATTGATAGGCTTACGATGCTACTCACGAATGAAGCATCCATTAAAGATGTTATTCTTTTTCCAGCCATGAA
GCCACTCAATGACACCGATGAACAAACACAAAAAGATGAGGAATCAAAATGA

Protein sequence :
MFQRKQQPLGKEDTILIFQDQYQQQRIEKGKALHALGRNPYRHNITKDTSTKEFLECYAYVIESELKRDEHKSNTIVGRI
KFLRHMGKAAFAKIEDEHGVVQIYFSRESIGEAWFDEAKKLVEVGDIISVTGFPFVTKTGELSLHVKVMEVATKSIIPLP
EKFHGLQDKELRYRKRYLDMIMNADVRKTFKIRSKIVSEIRHFFEERDFLEVETPMMHPIAGGANAKPFVTHHNALGIDR
YLRIAPELYLKRLVVGGFEAVFEINRNFRNEGMDQTHNPEFTMIEFYWAYHNYHDLMRLTEEMFDVLLKKLKLPRKLPYG
EMEIDFSKPFRKIAFRAALSEIGGIPDEILEDCQKIIAYIQSQGFSVESKLTLGKLYEELFDLFVEEKLIDPTFIIDYPI
EISPLARRSESNPNIAERFELFIAGREIANGFNELNDPIDQYERFAKQLQAKNAGDDEAHEMDEDYVHALGYGLPPTAGQ
GLGIDRLTMLLTNEASIKDVILFPAMKPLNDTDEQTQKDEESK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 1e-109 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sulba_0634 YP_006403517.1 lysyl-tRNA synthetase VFG1668 Protein 6e-110 50