Gene Information

Name : Sulba_0603 (Sulba_0603)
Accession : YP_006403486.1
Strain : Sulfurospirillum barnesii SES-3
Genome accession: NC_018002
Putative virulence/resistance : Unknown
Product : hydroxymethylpyrimidine synthase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 558981 - 560849 bp
Length : 1869 bp
Strand : -
Note : PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC

DNA sequence :
ATGAGTAAAGTACTCGACAACCTCGAAAAAATAGATGCTTCATACATTCAAAACTTCCCAAGCTCTAAGAAAATCTACAT
CCAAGGCTCCAGAGCCGACATCCAAGTCCCGATGCGTGAAATCACCCTCAGTCCAACCTCATTAAGAGATGGCACCTTTG
AAGAAAACCCACCGCTTCATGTGTACGACACCTCAGGCGTTTACACCGATCCCAATGTCACCATTGACTTGCACCAAGGC
TTAAAACCCATTCGTGCGAAATGGATCGAAGAGCGAGCCGACACCGAACAGTTGAGCGATTTTAGCTCTATCTATTTTCA
CAAACGTCACGACGACCAAGAACTAAACGCCCTACGCTTCCCCAATCTTAAAAAACCTCGCCGTGCACAAAAAGGTAAAA
ACATCACCCAAATGCACTATGCAAGAAAAGGCATCATCACCCCTGAGATGGAGTATGTTGCCATTCGTGAAAACTGCAAC
TTAGAAGTGGCACGTCAAAACAAACTCTTAGGCGCTCAACACAAAGGGGAACATTTTGGCGCGAATTTGCCTGAGGTTTA
CACCGCAGAATTTGTCCGTCAAGAGATCGCCGCAGGTCGAGCGGTACTACCTCTCAATGTCAACCACCCTGAAGCCGAAC
CGATGATCATCGGTCGAAACTTCATGGTCAAGATCAACGCCAACATTGGCAACTCCGCCACCACCTCCTCCATCGAAGAA
GAGGTCGAGAAGATGCTATGGTCAACCCGTTGGGGTGGCGACACGGTTATGGACTTGTCCACAGGTAAAAACATCCACGA
AACCAGAGAGTGGATACTCCGAAACTCCGCTGTGCCCATCGGAACCGTGCCGATTTACCAAGCCTTAGAAAAAGTTAATG
GCATCGCCGAAGACCTTACATGGGAAGTTTATCGTGACACCCTCATCGAACAAGCCGAACAAGGCGTGGACTACTTCACC
ATTCACGCAGGCGTGCGTCTAGCATACGTGCCTATGACGGCTAAACGTTTGACGGGCATCGTCTCTCGTGGTGGAAGTAT
CATGGCAAAATGGTGTCTGCACCATCATAAAGAAAACTTCCTTTACACCCATTTTGAGGAGATCTGTGACATCATGAAAG
CGTATGATGTCGCCTTTTCCTTGGGTGATGGCTTACGCCCAGGCTCCCTCTACGATGCCAACGATGAAGCGCAATTTGCC
GAGTTAGAGACGCTAGGAGAACTTACCAAAATCGCATGGAAACACGATGTACAAGTGATGATCGAAGGACCGGGACACGT
GCCGATGCAGAAAATCAAAGAGAACATGACCAAAGAGTTAGAGGACTGTTTTGAAGCACCCTTCTACACCCTTGGACCGC
TCGTCACCGACGTCGCCCCAGGGTATGATCACATCACCTCCGCCATTGGTGCTGCGCAAATCGGCTGGTACGGCACAGCG
ATGCTCTGCTACGTCACCCCAAAAGAGCATTTAGGTCTGCCAAACCGTGAAGACGTCAAAGAAGGCATCATCGCCTACAA
GATTGCCGCCCACGCCGCAGACCTTGCCAAAGGCTTCCCAGGAGCGCAAATCCGTGACAACGCCATGAGCAAAGCCCGTT
TTGAGTTTAGATGGTACGACCAGTTCAACATCGGCTTCGACCCAGACCGAGCTCGTGAATACCACGACAAAACCCTACCC
GTAGAGAGTGCCAAAATCGCACACTTCTGCTCCATGTGTGGCCCAAAATTTTGCTCGATGAAAATCTCGCAGGATGTCAG
AGACTATGCTGAGAAAATCGGTGCGGAAAATGTGGAAGTCGCCCTAAAAAAAGGCATGGAAGAACAAGCTGAACACTTTA
AAGAGAGTGGTGGACAGATTTACATGTAA

Protein sequence :
MSKVLDNLEKIDASYIQNFPSSKKIYIQGSRADIQVPMREITLSPTSLRDGTFEENPPLHVYDTSGVYTDPNVTIDLHQG
LKPIRAKWIEERADTEQLSDFSSIYFHKRHDDQELNALRFPNLKKPRRAQKGKNITQMHYARKGIITPEMEYVAIRENCN
LEVARQNKLLGAQHKGEHFGANLPEVYTAEFVRQEIAAGRAVLPLNVNHPEAEPMIIGRNFMVKINANIGNSATTSSIEE
EVEKMLWSTRWGGDTVMDLSTGKNIHETREWILRNSAVPIGTVPIYQALEKVNGIAEDLTWEVYRDTLIEQAEQGVDYFT
IHAGVRLAYVPMTAKRLTGIVSRGGSIMAKWCLHHHKENFLYTHFEEICDIMKAYDVAFSLGDGLRPGSLYDANDEAQFA
ELETLGELTKIAWKHDVQVMIEGPGHVPMQKIKENMTKELEDCFEAPFYTLGPLVTDVAPGYDHITSAIGAAQIGWYGTA
MLCYVTPKEHLGLPNREDVKEGIIAYKIAAHAADLAKGFPGAQIRDNAMSKARFEFRWYDQFNIGFDPDRAREYHDKTLP
VESAKIAHFCSMCGPKFCSMKISQDVRDYAEKIGAENVEVALKKGMEEQAEHFKESGGQIYM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 72
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 72
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 70