Gene Information

Name : Sulba_2308 (Sulba_2308)
Accession : YP_006405158.1
Strain : Sulfurospirillum barnesii SES-3
Genome accession: NC_018002
Putative virulence/resistance : Virulence
Product : FliI/YscN family ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2261804 - 2263108 bp
Length : 1305 bp
Strand : -
Note : PFAM: ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATPase FliI/YscN family

DNA sequence :
ATGCCCCTTTCCCGTCTTAAAACAAAACTTCAAGCCAAAAGCCTCTCCCCTATGTTTGGTACCATTACCAAAATCAGCTC
TACCACCATCGAAGCATGTGGGCTTCGTCCGAGTATTGGTGATATTGTTAATTTGGTCTCTTTGGATAGTCCAAAAAGTG
AATTAGGTATGGTTACAGAGGTAGATCGCAATGCTTTTTTTATCTCTCCTTTTGGCTTTATTGAAGGGTTTAAAATTGGT
GATAAAGTCTTTATTAGCGAACAAGGGATGATGATTCCTGTAGGTGAAGAGCTTTTGGGTCGAGTGGTTGATCCGTTTAT
TCGCCCAAAAGATGGCAAAGGAACGATAGGTGCAAGTTCACAAGCACCCATTATGAAAGCACCTCTTGATGCAATGAAGC
GAGGGTTGATTACAGAGCCATTCCGTGTAGGGGTCAAGACAATTGATGGGCTCCTTACCTGTGGGAAAGGTCAAAAAATG
GGCATTTTTGCAGGCAGTGGCGTGGGTAAGTCAACGCTTATGGGGATGATTGTACGAGGTTCTGAAGCGCCTATTAAAGT
GGTGGCGCTCATTGGCGAGCGTGGACGTGAGGTACCTGAGTTTATTGAAAAAAACTTGGGTGGCAATCTGGAAAACACCG
TGATTATCGTTGCAACCAGTGATGATTCACCTTTAATGCGTAAATATGGAGCTTTTAGTGCGATGAGTGTGGCAGAGTAT
TTCAAAAATCAAGGCAGAGATGTTCTGTTTATGATGGACTCCGTGACCCGTTTTGCCATGGCGCAACGAGAGATTGGGCT
AGCATTGGGTGAACCGCCTACTTCTAAAGGGTATCCACCCTCTGTGTTATCACTTTTGCCACAGTTGATGGAGCGGGCGG
GTAAGGAAGAGGGTAAAGGTTCTATTACGGCATTCTTTACCGTTTTGGTTGAGGGTGACGACTTAAGTGACCCGATTGCG
GATCAATCACGCAGTATTTTAGATGGGCATATTGTGTTGAGCAGGGAATTAACCGATTATGGGATTTACCCACCAATTAA
TATTCAAAACAGTGCCTCAAGGGTTATGGGTGATGTGATTGATGGGGATCATAAAAAAGCGGCGATGCGTTTTAAGCGTT
TAAATTCCATTTTGAAGGAGAATGAAGTTTTAATTCGTATTGGAGCCTATGAAAAAGGGAATGATAAAGAATTGGATTTG
GCCATTGCGAAAAAAGAGAAAATGAATGGTTTTTTACAGCAAACTCCCGAAGAGGTCGTTGCGTTTGATGTGACGATTAA
TGAGCTAAAACAAATCATTGCGTGA

Protein sequence :
MPLSRLKTKLQAKSLSPMFGTITKISSTTIEACGLRPSIGDIVNLVSLDSPKSELGMVTEVDRNAFFISPFGFIEGFKIG
DKVFISEQGMMIPVGEELLGRVVDPFIRPKDGKGTIGASSQAPIMKAPLDAMKRGLITEPFRVGVKTIDGLLTCGKGQKM
GIFAGSGVGKSTLMGMIVRGSEAPIKVVALIGERGREVPEFIEKNLGGNLENTVIIVATSDDSPLMRKYGAFSAMSVAEY
FKNQGRDVLFMMDSVTRFAMAQREIGLALGEPPTSKGYPPSVLSLLPQLMERAGKEEGKGSITAFFTVLVEGDDLSDPIA
DQSRSILDGHIVLSRELTDYGIYPPINIQNSASRVMGDVIDGDHKKAAMRFKRLNSILKENEVLIRIGAYEKGNDKELDL
AIAKKEKMNGFLQQTPEEVVAFDVTINELKQIIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
escN YP_003223475.1 translocator EscN Virulence LEE Protein 5e-83 47
escN CAI43874.1 EscN protein Virulence LEE Protein 3e-83 47
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 3e-83 47
escN CAC81862.1 EscN protein Virulence LEE II Protein 2e-83 47
escN AAK26715.1 EscN Virulence LEE Protein 6e-83 47
escN AAL57542.1 EscN Virulence LEE Protein 6e-83 47
unnamed AAL06369.1 EscN Virulence LEE Protein 4e-83 47
escN AAC38383.1 EscN Virulence LEE Protein 2e-82 46
escN AAC31513.1 L0034 Virulence LEE Protein 1e-82 46
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 1e-82 46
escN NP_290268.1 hypothetical protein Virulence LEE Protein 1e-82 46
ECs4568 NP_312595.1 EscN Virulence LEE Protein 1e-82 46
escN YP_003236088.1 translocator EscN Virulence LEE Protein 1e-82 46
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 4e-78 46
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 4e-78 46
lscN AAO18044.1 LscN Virulence TTSS locus Protein 7e-82 45
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-86 44
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 1e-87 44
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 5e-85 44
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 1e-86 44
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 7e-85 44
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 1e-86 44
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-86 44
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-84 43
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-84 43
ysaN AAS66842.1 YsaN Not tested SSR-1 Protein 3e-65 43
invC AAS66861.1 InvC Not tested SSR-2 Protein 1e-61 43
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 5e-74 42
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 5e-74 42
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-74 42
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 7e-75 42
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 1e-74 42
ECs3730 NP_311757.1 ATP synthase SpaL Not tested LIM Protein 5e-59 42
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 2e-65 41
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 4e-67 41
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 2e-67 41
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 2e-67 41
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 4e-61 41
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 3e-74 41
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 3e-61 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sulba_2308 YP_006405158.1 FliI/YscN family ATPase VFG0192 Protein 4e-88 48
Sulba_2308 YP_006405158.1 FliI/YscN family ATPase VFG0390 Protein 5e-86 46
Sulba_2308 YP_006405158.1 FliI/YscN family ATPase VFG0048 Protein 1e-83 46
Sulba_2308 YP_006405158.1 FliI/YscN family ATPase VFG0730 Protein 1e-82 46
Sulba_2308 YP_006405158.1 FliI/YscN family ATPase VFG1254 Protein 6e-82 46
Sulba_2308 YP_006405158.1 FliI/YscN family ATPase VFG0812 Protein 6e-83 46
Sulba_2308 YP_006405158.1 FliI/YscN family ATPase VFG2499 Protein 2e-80 45
Sulba_2308 YP_006405158.1 FliI/YscN family ATPase VFG2144 Protein 1e-80 44
Sulba_2308 YP_006405158.1 FliI/YscN family ATPase VFG2331 Protein 2e-78 43
Sulba_2308 YP_006405158.1 FliI/YscN family ATPase VFG1008 Protein 8e-58 43
Sulba_2308 YP_006405158.1 FliI/YscN family ATPase VFG0515 Protein 6e-75 42
Sulba_2308 YP_006405158.1 FliI/YscN family ATPase VFG1778 Protein 6e-62 41