Gene Information

Name : Sulba_1879 (Sulba_1879)
Accession : YP_006404734.1
Strain : Sulfurospirillum barnesii SES-3
Genome accession: NC_018002
Putative virulence/resistance : Virulence
Product : nucleoside-diphosphate-sugar epimerase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1853432 - 1854493 bp
Length : 1062 bp
Strand : -
Note : PFAM: NAD dependent epimerase/dehydratase family

DNA sequence :
ATGAAGATTTTAGTGACAGGAACGGCAGGATTTATTGGTAGTCATTTAGCCAAGAGATTGTTGGAACGAGGTGATGAGGT
CATAGGACTTGATAACATCAATGACTACTATGACCAACGTGTCAAATACGGTAGGTTAGAAAGAGCAGGAATTGCACAAG
ATGTAATTGAGTATAACAAAATAGTACCATCCTCTTTACATGTAAATTATCGTTTTATTAAACTTAACCTTGAAGATAAA
GCATCTCTTGAAACGCTTTTTGCTTCTGAAAAATTTGATGCGGTGTGTAATCTTGCCGCACAAGCGGGGGTTCGTTATAG
TCTTAGTAATCCTCAAGCCTACATCGATAGCAATATTATTGGATTTATCAATATTTTGGAGTGTTGTAGGCATTATGGTG
TGAAAAATCTCAGTTATGCCAGTAGCTCATCGGTCTATGGACTCAATGAAACATTACCGTTTTCAACGGACGATAATGTT
GATCATCCCATTAGCTTGTATGCGGCCAGTAAAAAATCAAATGAACTGATGGCACACACGTATAGTCACCTTTTTGGCAT
AGCAACAACAGGACTTCGTTTCTTTACGGTGTATGGTCCATGGGGACGTCCTGATATGGCACTTTTTTTATTTACCAAAG
CAGCACTTGAGGGAAAAAGTATTGATGTGTTTAATAACGGAGAGATGCAGCGTGATTTTACCTATATTGATGATATTGTT
GAAGGTGTCATACGTGTGATTGACAATCCTGCAAAAAGTGATGCCTTATGGAATGGAAAAGATGGACGAGCTTCCACTTC
GTCTGCCCCGTATAAAGTCTATAATATTGGTAATAACAATCCTGTGAAACTGATGGATTTTATTGAGGCGATTGAGAAAA
AATTAGGAAAAAAAATAGAAAAAAACTTTTTGCCACTGCAAGCAGGCGATGTCCCTGCGACCTTTGCGGATGTGAGCGAT
TTGGTAGAGGATTTGGGATATAAGCCCGCAACACCGATTCAAGAGGGCATTGATACATTTGTGGATTGGTATGTGGAGTT
TTATCATTTGTCTCTAAAATAG

Protein sequence :
MKILVTGTAGFIGSHLAKRLLERGDEVIGLDNINDYYDQRVKYGRLERAGIAQDVIEYNKIVPSSLHVNYRFIKLNLEDK
ASLETLFASEKFDAVCNLAAQAGVRYSLSNPQAYIDSNIIGFINILECCRHYGVKNLSYASSSSVYGLNETLPFSTDDNV
DHPISLYAASKKSNELMAHTYSHLFGIATTGLRFFTVYGPWGRPDMALFLFTKAALEGKSIDVFNNGEMQRDFTYIDDIV
EGVIRVIDNPAKSDALWNGKDGRASTSSAPYKVYNIGNNNPVKLMDFIEAIEKKLGKKIEKNFLPLQAGDVPATFADVSD
LVEDLGYKPATPIQEGIDTFVDWYVEFYHLSLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1I AAA64648.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 4e-103 60