|
Name : Sulba_1842 (Sulba_1842) Accession : YP_006404697.1 Strain : Sulfurospirillum barnesii SES-3 Genome accession: NC_018002 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.11 Position : 1813168 - 1814412 bp Length : 1245 bp Strand : + Note : PFAM: Seryl-tRNA synthetase N-terminal domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: seryl-tRNA synthetase DNA sequence : ATGTTAGATATTAAACTGATTCAAAATGATTTTGACGCTGTGGCAACAGCATTACGTAAAAAGAAAGTGGATGAAAGCCT CTTAGAAGAAGTGCGAGCCATCTCTTTGGAGCTTAAATCCGCACGTCTGGTCTTAGAACCCCTCCAAGCCGAGCAAAATG CCAAAAGCAAACTTTTTGGTGTGTATGCCAAAGAAGGAAAAGACGTCAATGCCCTTAAAGCCGAACTCTCAGAGAATAAA GAAAAAATTGCTGAAGCAACCGAGGTTGTAAGAGCGTTAGAAGAAAAGCTTGAAGCACTTGCCACCATCATTCCCAATAT GCCCTCCCCTTTAGTACCTGATGGCGAAGATGAAAACGATAATGTGGAACTCAAGCGCGTTCTTGTGCCTAAAACCTTCT CCTTCACACCTAAAGAGCATTGGGACATCGACAGCAAACAAAACTGGATTGACTTTGAGCGTGGCGTGAAGCTTTCCAAA AGCCGTTTTTCCGTCCTCAAAAATGAAGCCGCACGATTGGAGCGTGCTTTAATTAATTACATGCTTGATTTTAACCGAAG TCGAGGTTTTGCTGAAGTAGCGGTTCCTTACATTGTAAACCGTGAAACCTTAATGGGCACAGGTCAACTGCCTAAATTTG AAGATGATTTATTTAAAATTGAGGGCGAAGAGCTTTTTTTGATTCCCACCGCCGAAGTACCCGTGACCAATCTTTTCAGA GATGAGATTTTAAGCAAAGAAGAGCTTCCTCTTAAAATGACCGCCTATTCAGCATGTTTTCGTAAAGAAGCTGGCAGTGC GGGTAAAGACACACGAGGTATGATTCGCCAACACCAATTTGACAAAGTAGAGCTCGTCTGTATCACCACACCTGAGCAAA GTGAAGCGGTGTTTGACGAGATGCTCTCCTGCGCTTCTGATTTGCTGACTTCCCTAGGACTCCCTCACCGTCACTTGATG CTTTGTGGTGGCGACTTAGGGTTTAGTGCGGCAAAAACCGTGGATTTGGAAGTGTGGCTCCCTGGGCAAAACCGCTACCG TGAAATCAGTTCTGTGTCCAACACCTTTGATTTTCAAGCCAGACGTGCGAAAATAAGATTCAAAGATGAGGGTAAAAACC GCTTGGTTCACACCCTTAATGGCTCTTCTCTTGCCGTTGGAAGAACACTCATTGCCATTATGGAAAACTACCAAAATGAA GATGGCACCGTGTCCATCCCTGACGTTTTGAAAAAGTACATGTAA Protein sequence : MLDIKLIQNDFDAVATALRKKKVDESLLEEVRAISLELKSARLVLEPLQAEQNAKSKLFGVYAKEGKDVNALKAELSENK EKIAEATEVVRALEEKLEALATIIPNMPSPLVPDGEDENDNVELKRVLVPKTFSFTPKEHWDIDSKQNWIDFERGVKLSK SRFSVLKNEAARLERALINYMLDFNRSRGFAEVAVPYIVNRETLMGTGQLPKFEDDLFKIEGEELFLIPTAEVPVTNLFR DEILSKEELPLKMTAYSACFRKEAGSAGKDTRGMIRQHQFDKVELVCITTPEQSEAVFDEMLSCASDLLTSLGLPHRHLM LCGGDLGFSAAKTVDLEVWLPGQNRYREISSVSNTFDFQARRAKIRFKDEGKNRLVHTLNGSSLAVGRTLIAIMENYQNE DGTVSIPDVLKKYM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 5e-88 | 49 |
