Gene Information

Name : Sulba_1462 (Sulba_1462)
Accession : YP_006404325.1
Strain : Sulfurospirillum barnesii SES-3
Genome accession: NC_018002
Putative virulence/resistance : Virulence
Product : chaperone ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1430559 - 1433132 bp
Length : 2574 bp
Strand : -
Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB

DNA sequence :
ATGAACTCACTTTTTGAACAGCTGACAAACCAAATGCGTGAAGCCATTGAGAGCGCTATAAGCCTTGCTTTACACTCCAA
AAATAATGAAGCTGGTCCTTTACATGTAACATGGGGACTCATCACTAATTCTGCTTCTATTCTCAATCAAGTCTTTAATA
AAATGAATATTGACAAAAGTGCTATAGAGTTAGAAGTAAAAAGTGAAGTACAAAAACTACCAACCGTCTCGCATGTGAGC
AAAGAAAATATTGTTATTTCACGACATCTTGTGGAGAGTTTGCAAAAAGCAGAAGGGCTGATGAAACAAAAAGGAGACAG
TTATCTCTCTGTGGATACATGGTTGCTTGCCAATATTGATAGTGATCCATTGAAAAAGATTTTGGGTAAATACCTTGATC
TATTGCAGTTTAAGAAAAACCTTGAAGCCCTTCGTGGGGGTAAAAAAATCGACAAACAAAGTGCCGATGAAACTCTTGAA
TCGCTTGAAAAATACGGTATTAATTTGACCAAATTAGCCAGTGAGGGAAAATTGGATCCTGTGATTGGACGGGATGAAGA
GATTGGTCGAATGATGCAAATCTTAATTCGTAAAAGTAAAAATAATCCTATCTTGATTGGTGAGCCAGGAACGGGTAAAA
CGGCCATTGCGGAGGGATTAGCCCTTAGAATTGCACACAATGATGTGCCCTTAAGCCTTCAAAACAAAAGTGTGGTCGCC
CTCGATATGAGTGCCTTGATTGCAGGGGCAAAGTATCGTGGTGAGTTTGAAGACAGACTCAAAGCGGTCATTGATGAAGT
GAAAAAAAGTGGCAATATTATTTTATTTATCGATGAAATTCATACCATTGTGGGTGCAGGTGCGAGTGAGGGAAGTATGG
ATGCGGCCAATATTTTAAAGCCAGCTTTAGCCCGTGGTGAACTCCATACCATTGGTGCTACGACACTCAAAGAGTACCGC
AAATATTTTGAAAAAGATGCCGCACTGCAACGACGTTTTCAGCCTGTCACGGTGAATGAACCAAGTATTAATGAGGCATT
ACAGATTTTGCGGGGTATTAAAGAGAGCCTTGAGGCGCATCATCATGTAACCATCATGGATTCAGCATTGATTGCAGCAG
CAAAATTAAGTGCTCGATATATCAGTGATCGTTTTCTGCCCGATAAAGCGATTGATTTAATTGATGAGGCATCAGCAGAG
CTTAAGATGCAAATTGAGAGTGAACCTACAGAGCTAAGTCGTATTAAAAGGGTTATTGGTACGTTGATGGTAGAAAAAGA
GGCTCTTTTAATGGAAAAAAATAAAAAGAACGATGAACGCTTACAGTCCATTGAAAAAGAGCTCAGTGATGCCAAAGAGA
AACGCAATAGCCTTGAAATTCAATTTGAGACTGAAAAGAGTGTTTTTAATGACATTGCCTCACTTAAAACAGACGCAGAA
GCTTTGCGACGAGAAGCAGAAACGGCTAAGAAAAACAGTGATTTTAACAAGGCTGCAGAAATAGAGTATGGAAAATTACC
AGACCTTCTTAAACAAGAAGAAGAACTAAAGGTTAAGTGGGAAAAAATGGTAGAAAGTGGCACACTCTTAAAAAACAGTG
TTGATGAAGAGATGATCGCCACCATTGTCAGCAAATGGACAGGGATTCCTGTCACTAAAATGCTTCAAAGTGAGAAAGCA
AAAGTATTACATGTAGAAGAGTATCTTAAAAAAGAAGTGGTTGGACAAGATGAAGCTATTAAAGCGATTGGTCGAGCGAT
CAAGCGTAACAAAGCAGGTCTTAGTGAGCAAAGTAAGCCTATTGGTAGTTTCCTTTTCTTAGGTCCTACAGGGGTGGGTA
AAACCCAAAGTGCTAAGGCGTTAGCTAACTTTTTGTTTGATACCACTAAGGCATTGATTCGTTTTGATATGAGCGAATAC
ATGGAAAAACACTCTGTTAGTCGTTTGGTTGGGGCACCTCCAGGGTATGTGGGGTATGATGAGGGCGGACAACTCACAGA
AGCGGTACGTAGAAAACCCTACAGTGTTGTCCTGTTTGATGAGATTGAAAAAGCGCATCCTGATGTTTTTAATATTTTGC
TTCAAGTGCTTGATGAAGGGCGATTAACGGATAATAAAGGTGTTACGGTTGATTTTAAAAACACGATTATTATTCTAACG
TCCAATATTGCCAGCGATAAAATCATGGCGTATGAGGGTGAAAAACGCACCGAAGAGGTGATGAAAGAGTTGCGCACACA
TTTTAAACCCGAATTTTTGAACCGACTGGATGACATCATTATTTTCAATCCTTTGAGCGAAGATGGTTTACGTGAAATTG
TAAGCATTATGTTTAAAGATATTGAGACCAAGCTCTCAGCCAAAGAGATAAAAGCGGAGCTTACACTTCGTGCAAAAGCC
TTAATTGCTGAAGCGGGATTTGATCCTGTGTATGGGGCAAGACCCCTTAAACGCGCACTCTATGAGCTTGTTGAGGACAG
ATTAGCAGAGCTTATTTTGGAAGAGAAATTGCATGAGGGCGAAAGCATCGTCATTGATGCAAATGAAGGTGAAATTGTTA
TCCATCAACATTAA

Protein sequence :
MNSLFEQLTNQMREAIESAISLALHSKNNEAGPLHVTWGLITNSASILNQVFNKMNIDKSAIELEVKSEVQKLPTVSHVS
KENIVISRHLVESLQKAEGLMKQKGDSYLSVDTWLLANIDSDPLKKILGKYLDLLQFKKNLEALRGGKKIDKQSADETLE
SLEKYGINLTKLASEGKLDPVIGRDEEIGRMMQILIRKSKNNPILIGEPGTGKTAIAEGLALRIAHNDVPLSLQNKSVVA
LDMSALIAGAKYRGEFEDRLKAVIDEVKKSGNIILFIDEIHTIVGAGASEGSMDAANILKPALARGELHTIGATTLKEYR
KYFEKDAALQRRFQPVTVNEPSINEALQILRGIKESLEAHHHVTIMDSALIAAAKLSARYISDRFLPDKAIDLIDEASAE
LKMQIESEPTELSRIKRVIGTLMVEKEALLMEKNKKNDERLQSIEKELSDAKEKRNSLEIQFETEKSVFNDIASLKTDAE
ALRREAETAKKNSDFNKAAEIEYGKLPDLLKQEEELKVKWEKMVESGTLLKNSVDEEMIATIVSKWTGIPVTKMLQSEKA
KVLHVEEYLKKEVVGQDEAIKAIGRAIKRNKAGLSEQSKPIGSFLFLGPTGVGKTQSAKALANFLFDTTKALIRFDMSEY
MEKHSVSRLVGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNILLQVLDEGRLTDNKGVTVDFKNTIIILT
SNIASDKIMAYEGEKRTEEVMKELRTHFKPEFLNRLDDIIIFNPLSEDGLREIVSIMFKDIETKLSAKEIKAELTLRAKA
LIAEAGFDPVYGARPLKRALYELVEDRLAELILEEKLHEGESIVIDANEGEIVIHQH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 2e-103 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sulba_1462 YP_006404325.1 chaperone ATPase VFG2076 Protein 1e-115 43
Sulba_1462 YP_006404325.1 chaperone ATPase VFG2084 Protein 4e-112 42