Gene Information

Name : Sulba_1139 (Sulba_1139)
Accession : YP_006404010.1
Strain : Sulfurospirillum barnesii SES-3
Genome accession: NC_018002
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1102249 - 1102992 bp
Length : 744 bp
Strand : +
Note : PFAM: FliP family; TIGRFAM: type III secretion apparatus protein, YscR/HrcR family; flagellar biosynthetic protein FliP

DNA sequence : 
TTGAAAAACCTTAAGAGAATTTTACTTTTACTTGTGATGGGTATGACACCAATGGCATTTGGTGCTGATACCATTCCTAC
CGTGAACCTCTCTTTAAGTGCACCAGACACTCCTCAACAGCTTGTGACCAGCATGAATTTGGTGTTGGTACTGACCATTC
TAACACTCGCTCCTTCGTTGATTTTTATGATGACCAGTTTTTTACGCCTTTTAATTGTTTTCTCTTTTTTACGCCAAGCC
ATGGGTACGCAACAAATGCCTCCCTCTCAAGTTATGGTCTCTTTGGCAATGATTTTAACGTTTTTTATTATGGAACCTGT
TATGAAAGAGTCATACGATGTGGCAGTAAAACCTTATTTAGCAGAAAAAATGAGCTATCAAGAAGCGTTTGAGAAAGGCT
CAGCACCTTTTAAAGCGTTTATGATTCGCAATACCCGTGAGAAAGATTTGGCACTTTTCTTTCGTATTCGAAACCTTGAA
AATCCTAAAAATATTGAAGATGTGCCCTTAACCGTGGCGATGCCAGCCTTTATGATCAGCGAACTTAAAACCGCTTTTGA
GATAGGCTTTTTGCTCTACTTACCTTTTTTGGTTATTGATATGGTGGTCAGCTCCGTGTTGATGGCGATGGGTATGATGA
TGCTTCCACCTGCTATGATTTCTCTACCCTTTAAGTTGCTTATCTTTGTGTTGGTAGATGGATGGAACTTGCTGGTACAA
CGATTGGTGGAGAGTTTTCACTAG

Protein sequence : 
MKNLKRILLLLVMGMTPMAFGADTIPTVNLSLSAPDTPQQLVTSMNLVLVLTILTLAPSLIFMMTSFLRLLIVFSFLRQA
MGTQQMPPSQVMVSLAMILTFFIMEPVMKESYDVAVKPYLAEKMSYQEAFEKGSAPFKAFMIRNTREKDLALFFRIRNLE
NPKNIEDVPLTVAMPAFMISELKTAFEIGFLLYLPFLVIDMVVSSVLMAMGMMMLPPAMISLPFKLLIFVLVDGWNLLVQ
RLVESFH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscR AAO18040.1 LscR Virulence TTSS locus Protein 2e-27 44
ssaR YP_216427.1 type III secretion system protein Virulence SPI-2 Protein 1e-28 43
ssaR NP_460384.1 type III secretion system protein Virulence SPI-2 Protein 1e-28 43
ssaR CAA68199.1 secretion system apparatus, SsaR Virulence SPI-2 Protein 8e-29 43
yscR NP_805090.1 type III secretion system protein Virulence SPI-2 Protein 4e-28 42
yscR NP_456109.1 putative type III secretion protein Virulence SPI-2 Protein 4e-28 42
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 4e-26 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sulba_1139 YP_006404010.1 flagellar biosynthetic protein FliP VFG2338 Protein 7e-41 56
Sulba_1139 YP_006404010.1 flagellar biosynthetic protein FliP VFG2494 Protein 6e-46 53
Sulba_1139 YP_006404010.1 flagellar biosynthetic protein FliP VFG1259 Protein 8e-44 49
Sulba_1139 YP_006404010.1 flagellar biosynthetic protein FliP VFG2016 Protein 2e-41 45
Sulba_1139 YP_006404010.1 flagellar biosynthetic protein FliP VFG0394 Protein 2e-28 44
Sulba_1139 YP_006404010.1 flagellar biosynthetic protein FliP VFG0519 Protein 4e-29 43
Sulba_1139 YP_006404010.1 flagellar biosynthetic protein FliP VFG0188 Protein 2e-28 43
Sulba_1139 YP_006404010.1 flagellar biosynthetic protein FliP VFG0044 Protein 3e-27 42