Gene Information

Name : Desfe_0451 (Desfe_0451)
Accession : YP_006401931.1
Strain : Desulfurococcus fermentans DSM 16532
Genome accession: NC_018001
Putative virulence/resistance : Unknown
Product : pyridoxal phosphate synthase yaaD subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 427196 - 428203 bp
Length : 1008 bp
Strand : +
Note : PFAM: SOR/SNZ family; TIGRFAM: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1; COGs: COG0214 Pyridoxine biosynthesis enzyme; InterPro IPR001852; KEGG: dka:DKAM_0482 pyridoxal biosynthesis lyase PdxS; PFAM: Vitamin B6 biosynthesis protein; SPTR: Py

DNA sequence :
TTGAAGCTCGTCGACGCCTACATGTTCCTCGAGGAGCTAGGAAGCCTTCTCTACAAGCTCTTAGAGCAAAGGGATAAACT
CAGGGAGGAGGGATACCCTGTTCCAGGGAGAGAGGTAGCAACACCCCTGGTGAAATACGGGTTTGTATCCATGCTTAAAG
GCGGGGTCATCATGGATGTGACTAATCCTGAGCAGGCAATCATAGCTGAGGAGGCAGGTGCTGTAGGGGTGATGGTGCTT
GATAAATTACCCTACGATGTCAGAATGGCTGGAGGTGTCGCGAGAACAGCTGATGTGAAGGTTATAGAGGAGGTAATGAA
CTCTATAACTATACCTGTCTCAGCGAAATGTAGGATAGGGCATGAATCGGAGGCCAGGGTTCTAGAGGAAGTAGGGGTTG
ACCTAATAGATGAGAGTGAAGTGTTGACGCCTGTCGATGAGAAAGCCCATATTAATAAATGGTTGTTCAAGACGCCGTTT
GTCAACGGTGCTAGAAGTCTCCCAGAGGCGTTGAGAAGAATCTATGAGGGAGCATCAATGATCAGAACCAAGGGGGAGCC
GGGTACTGGTAACGTAGCTGAGGCCGTTAAGCACATAAAGATCGTAAACAGGGACATCTACATGCTCAACGGCTTCTATA
GGAACGGAGATATAGAGGCGATATGGGTTTACTCGAAGGAGAACCGAGTTCCCTACGAGCTTGCTCTTCTAACAGCCAGA
CTAGGGAGACTGCCTGTCGTGAACTTTGCAGCTGGAGGGATAGCGACGCCTGCGGATGCAGCCTTAATGATGTGGCTTGG
TGCCGATGGGGTCTTCGTTGGCTCAGGCATATTCAAGAGTAATGATCCAGAGGCCAGGGCCCGAGGGATAGTATTAGCAA
CAACCTACTGGGATGACCCGGAGACGGTGCTTGAGGCGCAGAAAATGGTGTCTGAGAAAGCTTCGATGCTCGGGATAGAT
ATCAGGAGGCTTAAACCCGAGGAGTTGATGCAGGAGCGAGGTGTGTAG

Protein sequence :
MKLVDAYMFLEELGSLLYKLLEQRDKLREEGYPVPGREVATPLVKYGFVSMLKGGVIMDVTNPEQAIIAEEAGAVGVMVL
DKLPYDVRMAGGVARTADVKVIEEVMNSITIPVSAKCRIGHESEARVLEEVGVDLIDESEVLTPVDEKAHINKWLFKTPF
VNGARSLPEALRRIYEGASMIRTKGEPGTGNVAEAVKHIKIVNRDIYMLNGFYRNGDIEAIWVYSKENRVPYELALLTAR
LGRLPVVNFAAGGIATPADAALMMWLGADGVFVGSGIFKSNDPEARARGIVLATTYWDDPETVLEAQKMVSEKASMLGID
IRRLKPEELMQERGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 1e-59 53
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-59 53
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-59 52