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Name : kdpB (USDA257_c09560) Accession : YP_006396305.1 Strain : Sinorhizobium fredii USDA 257 Genome accession: NC_018000 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase subunit B Function : - COG functional category : - COG ID : - EC number : 3.6.3.12 Position : 995962 - 998049 bp Length : 2088 bp Strand : + Note : - DNA sequence : ATGAGCCAGTCCAAATCCACGAGCATCATGGACGCTCGCATCCTCATACCCGCCATCGGCGATGCCTTCCGGAAGCTCAA TCCGGAGGCGCTCGCCCGGAACCCGGTAATGTTCGTCGTCGCCGTCGTCTCCGCTTTGACCACCGTCCTGCTTCTCCGTG ACCTGATCACGGGCGGCGGGAACATCGGCTTCTCGTTCCAGATCGTCGTCTGGCTTTGGTTCACCGTGCTTTTCGCCAAT TTTGCCGAAGCGGTGGCCGAGGGACGCGGCAAGGCGCAAGCGGAATCGCTGCGGCGGACGCGCACGGAAACCCAGGCGAA GCTGCTGAAGGGCGATGATATCAGGAACTTCAAGATCGTGCCCGGCACGAGCCTGAAAGTCGGCGATGTCGTGCTTGTCG AGGCCGGGGACATTATCCCGTCGGACGGCGAAGTCGTCGAAGGCGTCGCCTCGGTCAACGAGGCGGCCATAACCGGCGAA TCCGCGCCGGTGATCCGCGAATCGGGCGGTGACCGGTCCGCCGTCACCGGCGGCACGCAGGTGCTTTCCGACTGGATCCG AGTCCGGATCACCGCGGCGTCCGGCTCGACCTTCATCGACCGCATGATCGCGCTCGTCGAAGGCGCCGAGCGGCAAAAGA CGCCCAACGAGATCGCGCTCAACATCCTGCTTGCCGGCATGACGCTGATCTTCGTTCTGGCGACGGCGACGATCCCGAGC TTCGCCACCTATGCCGGCGGCTACATTCCCGTGCTCATTCTCGTGGCGCTCTTCGTCACGCTGATACCCACGACGATCGG CGCGCTTCTGTCGGCGATCGGCATTGCCGGCATGGACCGGCTGGTGCGCTTCAACGTACTTGCCATGTCCGGCCGTGCCG TCGAGGCGGCAGGCGACGTCGATACGCTGCTGCTCGACAAGACCGGCACCATTACGCTCGGCAATCGCCAGGCCACGGAG TTCAAGCCGGTTCGAGGCGTCACCGAGCAGGAATTGGCGGATGCCGCACAGCTTGCGTCGCTCCCCGACGAGACTCCGGA GGGCCGCTCCATCGTCGTGCTCGCCAAGGAGAAATACGGCATCCGCGCCCGCGACATGGGAAGCCTGCATGCCCACTTCG TGCCGTTCACGGCGCAAAGCCGAATGAGTGGCGTCGATTTCGACGGCTCCAGCATCCGCAAGGGGGCGGTCGACGCAGTT CTTCATTATGTCGATCGTACCACTGTCGCGAGCATCGATGGTACTGCGCGGGTGGCCGTGCGTGAACCGCAGGCAGCCCG CGAGCTCCAGGCGATCGCCGACGAGATCGCCAAGGCGGGCGGTACGCCCCTTGCCGTGGTCAAGGACGGCCGACTACTCG GTACCGTCCATCTCAAGGACATCGTCAAAGGCGGCATCAAGGAGCGCTTCGCCGAATTGCGCCGCATGGGCATTCGCACC GTGATGATCACTGGCGACAATCCGATGACGGCTGCGGCGATCGCGGCGGAAGCGGGCGTCGACGATTTCCTGGCTCAGGC CACACCCGAGAACAAGCTCAGCCTCATCCGCGAGGAACAGGCGAAAGGCAAGCTCGTGGCGATGTGCGGCGACGGCACGA ACGACGCGCCCGCGCTCGCCCAGGCGGATGTCGGCGTCGCCATGAACACCGGCACGGTGGCGGCGCGTGAAGCCGGCAAC ATGGTCGACCTCGATTCCGACCCGACGAAGCTCATCGAGATCGTCGAAATCGGCAAGCAATTGCTGATGACGCGCGGCGC CTTGACGACCTTCTCGATTGCCAACGACGTCGCCAAGTACTTCGCCATCATCCCGGCGATGTTCCTGGCTTTCTATCCGC AGCTCGGCGCGCTCAACGTCATGGGCCTGAAGACGCCCGAGAGCGCAATTCTCTCGGCGATCATCTTCAACGCGCTCATC ATCGTCGCGTTGATACCGCTTTCGCTGAAGGGCGTGAAATATCGGCCGATCGGCGCAGGCGCGCTGCTCTCGCGCAACCT GCTGATCTACGGCCTCGGCGGCATCATCGTTCCCTTCATCGGCATCAAAGTGATTGACGTCGTCATCACGACGCTCGGCC TCGCATAA Protein sequence : MSQSKSTSIMDARILIPAIGDAFRKLNPEALARNPVMFVVAVVSALTTVLLLRDLITGGGNIGFSFQIVVWLWFTVLFAN FAEAVAEGRGKAQAESLRRTRTETQAKLLKGDDIRNFKIVPGTSLKVGDVVLVEAGDIIPSDGEVVEGVASVNEAAITGE SAPVIRESGGDRSAVTGGTQVLSDWIRVRITAASGSTFIDRMIALVEGAERQKTPNEIALNILLAGMTLIFVLATATIPS FATYAGGYIPVLILVALFVTLIPTTIGALLSAIGIAGMDRLVRFNVLAMSGRAVEAAGDVDTLLLDKTGTITLGNRQATE FKPVRGVTEQELADAAQLASLPDETPEGRSIVVLAKEKYGIRARDMGSLHAHFVPFTAQSRMSGVDFDGSSIRKGAVDAV LHYVDRTTVASIDGTARVAVREPQAARELQAIADEIAKAGGTPLAVVKDGRLLGTVHLKDIVKGGIKERFAELRRMGIRT VMITGDNPMTAAAIAAEAGVDDFLAQATPENKLSLIREEQAKGKLVAMCGDGTNDAPALAQADVGVAMNTGTVAAREAGN MVDLDSDPTKLIEIVEIGKQLLMTRGALTTFSIANDVAKYFAIIPAMFLAFYPQLGALNVMGLKTPESAILSAIIFNALI IVALIPLSLKGVKYRPIGAGALLSRNLLIYGLGGIIVPFIGIKVIDVVITTLGLA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 0.0 | 60 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 0.0 | 60 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 4e-153 | 54 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 5e-152 | 53 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 5e-152 | 53 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 4e-152 | 53 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 5e-152 | 53 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 5e-152 | 53 |
