Gene Information

Name : pecM (USDA257_c61500)
Accession : YP_006401404.1
Strain : Sinorhizobium fredii USDA 257
Genome accession: NC_018000
Putative virulence/resistance : Resistance
Product : protein PecM
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6406508 - 6407512 bp
Length : 1005 bp
Strand : +
Note : -

DNA sequence :
ATGTGCACCCATGGCCTGACCGGCGGAGCCGCTCGCGCCTTTGTCATGGCTCTAATAGACCGATATCTTGACGTCAAGAT
AGTTTCCATTTACGGTTATCTTGATATCAAGATTCTTGAGATGAAGAAAATGCGGACACAAAACTTGGACATTGCCCTTA
CGGCCATAGCCCCGGCGATCTGGGGTAGTACCTATCTGGTTACCACCGAATTCCTGCCCGCCGGCTACCCGTTGACCGTG
GCAATGCTGAGAGCCCTGCCGGCCGGCCTCCCACTGCTGCTCGTCGTCCGGCAGTTGCCGACGGGCATCTGGTGGCTGCG
CAGCTTTCTGCTCGGCGCACTCAACTTTTCTTTCTTTTGGGCGATGCTGTTCGTCTCCGCCTACCGCCTTCCGGGCGGTG
TTGCCGCGACGGTCGGCGCCATCCAGCCGCTGATTGTCGTGCTGCTGTCGCGGCTCGTTCTTGGTTCGCCGGTCCGAGTG
CTGAGCATCCTTGCCGGCGTGGCGGGCATGGCCGGGGTCGCGCTGCTGGTGTTGACCCCGGGGGCCGCACTCGATCCTCT
CGGCGTCGCGGCGGGCCTCGCAGGCGCCGTCTCCATGGCTTTCGGTACGGTGCTCAGCCGGCATTGGGCGCCGCCTGTCT
CGCCGCTGACCTTCACCGCCTGGCAATTGGCGGCCGGCGGCCTTCTCCTCGTTCCTGTAGCTCTATTCTTCGAGCCCTCC
CTGCCATCGCTCACCGCATCGAACCTGATGGGTTTCGCCTACCTCGGCCTGATCGGCGCCGCCTTCACCTATCTCCTCTG
GTTCCGCGGTCTCTCACGCCTGGAACCGTCGCAGGTCTCGCCGCTCGGCTTCCTCAGCCCTGTGGTGGCAATCCTGCTCG
GCTGGGGAGTACTCGGCCAACAGATGGCGGGAATACAAACGCTGGGAATCGTCGTCGTCTTTGCCAGCGTCTGGATGAGC
CAGCAGGCGCAGATGGCGCGTCGCCCTGCGCCCGTCCGCGCCTAG

Protein sequence :
MCTHGLTGGAARAFVMALIDRYLDVKIVSIYGYLDIKILEMKKMRTQNLDIALTAIAPAIWGSTYLVTTEFLPAGYPLTV
AMLRALPAGLPLLLVVRQLPTGIWWLRSFLLGALNFSFFWAMLFVSAYRLPGGVAATVGAIQPLIVVLLSRLVLGSPVRV
LSILAGVAGMAGVALLVLTPGAALDPLGVAAGLAGAVSMAFGTVLSRHWAPPVSPLTFTAWQLAAGGLLLVPVALFFEPS
LPSLTASNLMGFAYLGLIGAAFTYLLWFRGLSRLEPSQVSPLGFLSPVVAILLGWGVLGQQMAGIQTLGIVVVFASVWMS
QQAQMARRPAPVRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pecM AGK07028.1 PecM Not tested SGI1 Protein 9e-57 66
pecM AGK07086.1 PecM Not tested SGI1 Protein 9e-57 66
pecM ACN81012.1 PecM Not tested AbaR5 Protein 1e-56 66
pecM CAJ77067.1 Regulatory protein Not tested AbaR1 Protein 9e-57 66