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Name : kdsB (USDA257_c60490) Accession : YP_006401308.1 Strain : Sinorhizobium fredii USDA 257 Genome accession: NC_018000 Putative virulence/resistance : Virulence Product : 3-deoxy-manno-octulosonate cytidylyltransferase Function : - COG functional category : - COG ID : - EC number : 2.7.7.38 Position : 6309983 - 6310729 bp Length : 747 bp Strand : + Note : - DNA sequence : ATGAATCGTGAACTTTCGGGCAAAGCCCTCGTGCTCATTCCAGCGCGCATGGCCTCGACACGCCTGCCGGGCAAGCCGCT CGCCGACATCTGCGGCCTGCCGATGATCGTCCAGGTCGCCAAACGCGCCGCGGAAGCCGATGTCGGCCGAATCGTCGTCG CCGTCGATCATAGAGAGGTCTTCGAGGCGGTGAGCGACGCCGGTTTCGAGGCGATCATGACGCGCGTCGATCACCAGTCC GGGTCCGACCGGATCTACGAGGCGCTCACGAAGGCCGATCCAACCGGCGAGGCCGAGATCGTCATCAATGTCCAGGGCGA CCTGCCGACCATCGAGCCCGGTCCGATTCGCGCAGCGCTGAGGCCGCTCGAAAACGCGACGACCGACATCGCCACCCTGA CGGTGGAGATCACCGACGAGCACGAAAAGACCAATCCGAACGTCGTCAAGGTCGTCGGTTCGCCGCTTTCCGAGAGCCGG CTGCGCGCCCTCTATTTCACCCGCGCGACGGCACCCTATGGCGCGGGGCCGCTCTACCACCATATCGGCCTTTACGCCTA CCGGCGCAGGGCGCTCGAGACTTTCGTGTCGCTGAAGCCTTCGACGCTCGAAAGGCGCGAATCGCTCGAGCAGTTGCGGG CGCTCGAAGCCGGCATGCGCATCGATGTCGAGATCGCCAATTCCGTGCCGCTCGGCGTCGACACGCCGGCCGACCTGGAA AAAGCCCGCCGCATACTCTCGGCCTGA Protein sequence : MNRELSGKALVLIPARMASTRLPGKPLADICGLPMIVQVAKRAAEADVGRIVVAVDHREVFEAVSDAGFEAIMTRVDHQS GSDRIYEALTKADPTGEAEIVINVQGDLPTIEPGPIRAALRPLENATTDIATLTVEITDEHEKTNPNVVKVVGSPLSESR LRALYFTRATAPYGAGPLYHHIGLYAYRRRALETFVSLKPSTLERRESLEQLRALEAGMRIDVEIANSVPLGVDTPADLE KARRILSA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 7e-33 | 46 |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 3e-32 | 45 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 2e-32 | 45 |
